Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01216 | ATGGAGAAAACCACGCACCCAGAAAAGGTTTCTAGTTTATCAACAAATTTCAATAGAAAGTTTGCCAGTTTGAGCTCACCTGGCCGCACTCCCGATGCCGCCGATGATGCTAATAAATCAGATTCTGAAAAGCATCCAAATGATGATGATGCCTCCTCCCTCGATCATCACCACCACCTTCTTTCCCAATCTGAAATTGCCTCGCTCTTCCAAGAGGTTGATCGATTCCTCCACAGTTTGTCCACTGCTGCTGACAATGCATTCAATCCCATCCCTGACATTCCCTCCTCCGTTCATTCCTTGTCCAATCTGATGGACTCCATGACCTCCAGGTACAATTCTACCAAGAACCCCACCAAGCTCGGCAGAGATCCCGACCGGGATTCTTCCTTTTTCGAAGCTCTGGATCGCATTTCCAAGATTGCCATTAAATTGGGTGAATTCAATCTCTGCACTGCCACCATTCCTTCGCTCAATCGGACCACCGCTGCTCTACAGCGAGCCATGACGTTGTTGGATGAAGAATTCAACAACCTTCTGAAAGAATGCAAGCATCTCGAGCTCGAATCGAAACCTGAATCGAAATCTGACACCAAATCGTCAAAGCAATCGTCCTTCAAAACAAACCACGAATTACCAGATCAACATCACAGAACCGTTCCTGAGTGTTCCGACTCCGATAAGGAAGACGTATACCCTTCTTTCTCGCAGGAAACTGTGTCAAACATGAAGAGAATTGCCGGAACAATGATCTACGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAGAGGAATCTTGAACAAGCTCGGGTATGAAAGTATTAGCAATGATGAGGTTCAGAAAATGCACTGGGATACTCTTCAATCGGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTCCCAGGCGAGTTGAAGCTCTGTGACTCCGTTTTCACCGATCATCCCTTCATATCTCATACAATCTTCAGCAATTTAACAAGAGCAGTCATCATAAAGCTTCTCAACTTCGCAAACGCCGTCGTCTTAACAAAGCGGTCCGCTGAGAAGATGTTCAAATTACTGGACATGTACGAAAGGATCTGCGAATTAATTCCAGTAATCAATGGCTTCCCTGAAAATTGCAGAACGGAGCTAATTTCAGAAGCGGAAGGGGCAAAAAGTGGTATGGGAGAAGCAATAGTCGGAAGTTTCTACGACCTAGAAAGCTCAATCAGAAGCGACAACGCTAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTAACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAGAGAAACCCTAGAACAGGTCTTCCAATATATTGACCCTAAAACCGAAGAAGATCAATCAGCAAGAGTGGACGAGAACGACGACGCGTCGCTGAGAAATTCTCACCTCGCAACTCAGATCGCGATGGTGATGGATCTGCTAGATACGAATCTGGTAATGAGATCAAAATTGTACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACGTAGTACAGAAAATCAAAGGCTCAACCGGAATCAAGGAGTTGATGGGCGACCGTTGGTGCCGCAAGCGATCAACGAATCTGCGACAGTACCACAAAAACTACCAGAGAGAAACATGGAGTAAGGTGCTGCAATGCCTGAACCACGAAGGATTGATGGTGAACGGGAAGGTATCAAAGCCGATTTTGAAGGAGAGATTCAAAAGCTTCAACTCCATGTTCGACGAAATACACAAAGTGCAGAGCAGTTGGGTGGTGAGCGACGAGCAGCTTCAATCGGAGCTTCGGGTTTCGGTGTCGGCGGTGATGATTCCAGCGTACCGTTCGTTCGTGGGGAGATTCAAGCAGCATTTCGATCAGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCTGAAGACATTGAAGTATTGATCGAAGACCTGTTCGACGGAAATACCGCTTCCATGAAAAAGAAATCGTAG | 2034 | 46.17 | MEKTTHPEKVSSLSTNFNRKFASLSSPGRTPDAADDANKSDSEKHPNDDDASSLDHHHHLLSQSEIASLFQEVDRFLHSLSTAADNAFNPIPDIPSSVHSLSNLMDSMTSRYNSTKNPTKLGRDPDRDSSFFEALDRISKIAIKLGEFNLCTATIPSLNRTTAALQRAMTLLDEEFNNLLKECKHLELESKPESKSDTKSSKQSSFKTNHELPDQHHRTVPECSDSDKEDVYPSFSQETVSNMKRIAGTMIYAGYEKECCMSYSFLRQSSFRGILNKLGYESISNDEVQKMHWDTLQSEIDKWIAVVKKCSKSLFPGELKLCDSVFTDHPFISHTIFSNLTRAVIIKLLNFANAVVLTKRSAEKMFKLLDMYERICELIPVINGFPENCRTELISEAEGAKSGMGEAIVGSFYDLESSIRSDNAKIPVPGGAVHPLTRYIMNYLKYACEYRETLEQVFQYIDPKTEEDQSARVDENDDASLRNSHLATQIAMVMDLLDTNLVMRSKLYRDASLRYIFLMNNGRYVVQKIKGSTGIKELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLMVNGKVSKPILKERFKSFNSMFDEIHKVQSSWVVSDEQLQSELRVSVSAVMIPAYRSFVGRFKQHFDQGRQSEKYIKYQPEDIEVLIEDLFDGNTASMKKKS | 677 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9914479 | 9916512 | - | Cp4.1LG03g12840.1 | Cpe03g01216 | 466933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01216 | 677 | MobiDBLite | consensus disorder prediction | 34 | 55 | - | - | |
Cpe03g01216 | 677 | Pfam | Exo70 exocyst complex subunit | 302 | 663 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Cpe03g01216 | 677 | MobiDBLite | consensus disorder prediction | 188 | 229 | - | - | |
Cpe03g01216 | 677 | MobiDBLite | consensus disorder prediction | 8 | 25 | - | - | |
Cpe03g01216 | 677 | Gene3D | Exocyst complex component Exo70 | 112 | 676 | - | - | |
Cpe03g01216 | 677 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 58 | 675 | IPR004140 | GO:0000145|GO:0006887 | |
Cpe03g01216 | 677 | SUPERFAMILY | Cullin repeat-like | 112 | 667 | IPR016159 | - | |
Cpe03g01216 | 677 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 58 | 675 | - | - | |
Cpe03g01216 | 677 | Coils | Coil | 169 | 189 | - | - | |
Cpe03g01216 | 677 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cpe03g01216 | 677 | MobiDBLite | consensus disorder prediction | 209 | 229 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01216 | Cpe-Chr3:9914479 | Cpe13g00544 | Cpe-Chr13:5496933 | 0 | dispersed | |
Cpe03g01216 | Cpe-Chr3:9914479 | Cpe08g00067 | Cpe-Chr8:441455 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01216 | K07195 | - | cpep:111790186 | 1339.32 |