Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01216 ATGGAGAAAACCACGCACCCAGAAAAGGTTTCTAGTTTATCAACAAATTTCAATAGAAAGTTTGCCAGTTTGAGCTCACCTGGCCGCACTCCCGATGCCGCCGATGATGCTAATAAATCAGATTCTGAAAAGCATCCAAATGATGATGATGCCTCCTCCCTCGATCATCACCACCACCTTCTTTCCCAATCTGAAATTGCCTCGCTCTTCCAAGAGGTTGATCGATTCCTCCACAGTTTGTCCACTGCTGCTGACAATGCATTCAATCCCATCCCTGACATTCCCTCCTCCGTTCATTCCTTGTCCAATCTGATGGACTCCATGACCTCCAGGTACAATTCTACCAAGAACCCCACCAAGCTCGGCAGAGATCCCGACCGGGATTCTTCCTTTTTCGAAGCTCTGGATCGCATTTCCAAGATTGCCATTAAATTGGGTGAATTCAATCTCTGCACTGCCACCATTCCTTCGCTCAATCGGACCACCGCTGCTCTACAGCGAGCCATGACGTTGTTGGATGAAGAATTCAACAACCTTCTGAAAGAATGCAAGCATCTCGAGCTCGAATCGAAACCTGAATCGAAATCTGACACCAAATCGTCAAAGCAATCGTCCTTCAAAACAAACCACGAATTACCAGATCAACATCACAGAACCGTTCCTGAGTGTTCCGACTCCGATAAGGAAGACGTATACCCTTCTTTCTCGCAGGAAACTGTGTCAAACATGAAGAGAATTGCCGGAACAATGATCTACGCCGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAGAGGAATCTTGAACAAGCTCGGGTATGAAAGTATTAGCAATGATGAGGTTCAGAAAATGCACTGGGATACTCTTCAATCGGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTCCCAGGCGAGTTGAAGCTCTGTGACTCCGTTTTCACCGATCATCCCTTCATATCTCATACAATCTTCAGCAATTTAACAAGAGCAGTCATCATAAAGCTTCTCAACTTCGCAAACGCCGTCGTCTTAACAAAGCGGTCCGCTGAGAAGATGTTCAAATTACTGGACATGTACGAAAGGATCTGCGAATTAATTCCAGTAATCAATGGCTTCCCTGAAAATTGCAGAACGGAGCTAATTTCAGAAGCGGAAGGGGCAAAAAGTGGTATGGGAGAAGCAATAGTCGGAAGTTTCTACGACCTAGAAAGCTCAATCAGAAGCGACAACGCTAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTAACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAGAGAAACCCTAGAACAGGTCTTCCAATATATTGACCCTAAAACCGAAGAAGATCAATCAGCAAGAGTGGACGAGAACGACGACGCGTCGCTGAGAAATTCTCACCTCGCAACTCAGATCGCGATGGTGATGGATCTGCTAGATACGAATCTGGTAATGAGATCAAAATTGTACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACGTAGTACAGAAAATCAAAGGCTCAACCGGAATCAAGGAGTTGATGGGCGACCGTTGGTGCCGCAAGCGATCAACGAATCTGCGACAGTACCACAAAAACTACCAGAGAGAAACATGGAGTAAGGTGCTGCAATGCCTGAACCACGAAGGATTGATGGTGAACGGGAAGGTATCAAAGCCGATTTTGAAGGAGAGATTCAAAAGCTTCAACTCCATGTTCGACGAAATACACAAAGTGCAGAGCAGTTGGGTGGTGAGCGACGAGCAGCTTCAATCGGAGCTTCGGGTTTCGGTGTCGGCGGTGATGATTCCAGCGTACCGTTCGTTCGTGGGGAGATTCAAGCAGCATTTCGATCAGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCTGAAGACATTGAAGTATTGATCGAAGACCTGTTCGACGGAAATACCGCTTCCATGAAAAAGAAATCGTAG 2034 46.17 MEKTTHPEKVSSLSTNFNRKFASLSSPGRTPDAADDANKSDSEKHPNDDDASSLDHHHHLLSQSEIASLFQEVDRFLHSLSTAADNAFNPIPDIPSSVHSLSNLMDSMTSRYNSTKNPTKLGRDPDRDSSFFEALDRISKIAIKLGEFNLCTATIPSLNRTTAALQRAMTLLDEEFNNLLKECKHLELESKPESKSDTKSSKQSSFKTNHELPDQHHRTVPECSDSDKEDVYPSFSQETVSNMKRIAGTMIYAGYEKECCMSYSFLRQSSFRGILNKLGYESISNDEVQKMHWDTLQSEIDKWIAVVKKCSKSLFPGELKLCDSVFTDHPFISHTIFSNLTRAVIIKLLNFANAVVLTKRSAEKMFKLLDMYERICELIPVINGFPENCRTELISEAEGAKSGMGEAIVGSFYDLESSIRSDNAKIPVPGGAVHPLTRYIMNYLKYACEYRETLEQVFQYIDPKTEEDQSARVDENDDASLRNSHLATQIAMVMDLLDTNLVMRSKLYRDASLRYIFLMNNGRYVVQKIKGSTGIKELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLNHEGLMVNGKVSKPILKERFKSFNSMFDEIHKVQSSWVVSDEQLQSELRVSVSAVMIPAYRSFVGRFKQHFDQGRQSEKYIKYQPEDIEVLIEDLFDGNTASMKKKS 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9914479 9916512 - Cp4.1LG03g12840.1 Cpe03g01216 466933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01216 677 MobiDBLite consensus disorder prediction 34 55 - -
Cpe03g01216 677 Pfam Exo70 exocyst complex subunit 302 663 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe03g01216 677 MobiDBLite consensus disorder prediction 188 229 - -
Cpe03g01216 677 MobiDBLite consensus disorder prediction 8 25 - -
Cpe03g01216 677 Gene3D Exocyst complex component Exo70 112 676 - -
Cpe03g01216 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 675 IPR004140 GO:0000145|GO:0006887
Cpe03g01216 677 SUPERFAMILY Cullin repeat-like 112 667 IPR016159 -
Cpe03g01216 677 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 58 675 - -
Cpe03g01216 677 Coils Coil 169 189 - -
Cpe03g01216 677 MobiDBLite consensus disorder prediction 1 55 - -
Cpe03g01216 677 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01216 Cpe-Chr3:9914479 Cpe13g00544 Cpe-Chr13:5496933 0 dispersed
Cpe03g01216 Cpe-Chr3:9914479 Cpe08g00067 Cpe-Chr8:441455 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01216 K07195 - cpep:111790186 1339.32