Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01240 | ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGATGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCTCAGGTTCTCAGAATGTTAGGGAATGGTCGGTGTGAGGCGATGTGCATCGATGGAACAAAGCGTCTTTGCCATATCCGAGGGAAGATGCACAAAAAGGTTTGGATCGCAGCTGGTGATATAATACTTGTGGGTCTTCGCGACTATCAGGATGACAAAGCTGATGTCATCCTCAAGTATATGCCCGACGAAGCAAGGCTTTTGAAGGCATATGGTGAACTTCCTGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGGGCCGATGACTATCTCGAGTTCGAGGACGAAGATATCGATAAGATATAG | 438 | 47.49 | MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGIDDEDDGGADDYLEFEDEDIDKI | 145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10063914 | 10064351 | + | Cp4.1LG03g12770.1 | Cpe03g01240 | 466957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01240 | 145 | SUPERFAMILY | Nucleic acid-binding proteins | 2 | 144 | IPR012340 | - | |
Cpe03g01240 | 145 | Gene3D | - | 2 | 145 | IPR012340 | - | |
Cpe03g01240 | 145 | ProSitePatterns | Eukaryotic initiation factor 1A signature. | 41 | 63 | IPR018104 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cpe03g01240 | 145 | CDD | S1_IF1A | 33 | 109 | IPR001253 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | TIGRFAM | eIF-1A: translation initiation factor eIF-1A | 14 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | PANTHER | EIF-1A | 1 | 145 | IPR001253 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | Pfam | Translation initiation factor 1A / IF-1 | 32 | 93 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | SMART | eIF1neu4 | 28 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | Hamap | Translation initiation factor 1A [eif1a]. | 16 | 110 | IPR001253 | GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | ProSiteProfiles | S1 domain IF1 type profile. | 22 | 96 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Cpe03g01240 | 145 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE | 1 | 145 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01240 | Cpe-Chr3:10063914 | Cpe16g00399 | Cpe-Chr16:5528162 | 5.41E-101 | dispersed | |
Cpe03g01240 | Cpe-Chr3:10063914 | Cpe08g00083 | Cpe-Chr8:530343 | 1.89E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01240 | K03236 | - | ini:109155805 | 265.388 |