Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01241 ATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTTATGGGCATCGACGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGTACTCGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACATTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGGTTTGAAGGCTAATGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGGGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTTACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAGAAGTACAGAATCAAGTTATCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTTGCAAAGGTCACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAGTCAGACAAAGTGGATGAAGATGGGGCAACGGGTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCGAAAGGACGGTGCAAATTTTTCCAGGCTAGAAAACTCGAACAACTCACTCACTTCTGA 894 41.83 MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEEKREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10065231 10068944 + Cp4.1LG03g12730.1 Cpe03g01241 466958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01241 297 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Cpe03g01241 297 CDD RNase_HII_eukaryota_like 17 233 - -
Cpe03g01241 297 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Cpe03g01241 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Cpe03g01241 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 296 IPR001352 GO:0003723|GO:0004523
Cpe03g01241 297 PANTHER RIBONUCLEASE 7 296 - -
Cpe03g01241 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Cpe03g01241 297 Gene3D - 2 186 IPR036397 GO:0003676
Cpe03g01241 297 Gene3D Ribonuclease hii. Domain 2 187 235 IPR023160 GO:0004523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01241 K10743 - csv:101210143 577.785