Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01284 ATGGAGGACGATTTTGAGTTTCCATCTGCAAGCAATGTGGACGAGGAAATGGACATGCCTGAGGATGAAGCGGAGAGCCCGGTTATGAAGGTTGGCGAGGAGAAGGAGATTGGAAAGAATGGGCTGAAGAAGAAACTTGTTAAAGAAGGTGAAGGATGGGAAACTCCCGACACTGGTGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGGACTAAATTCGATTCCAGCCGTGACCGAGGAACGCCTTTCAAATTCAAGCTCGGGGAAGGGCAAGTGATTAAAGGATGGGATGAAGGTATCAGAACTATGAGGAAGGGTGAAAATGCAGTATTCACGATACCCCCTGGATTAGCTTATGGAGAGTCCGGTTCTCCTCCAACTATTCCACCGAATGCTACTCTTCAATTTGATGTTGAGCTGCTTTCATGGCACAGCGTCAAAGATATCTGTCAAGATGGAGGAATCCTCAAAAAGATCCTCGTCAAAGGAGATGGGTGGGATAAACCGAAGGATCTAGACGAAGTCCTGGTTCATTACGAGGCTCGCCGTGAAGATGGTACGCTAATCTCGAAGTCTGATGGGGTTGAATTCATCGTTGAAAATGGCTACTTCTGCCCTGCTTTGGCAACAGCTGTGAAAACGATGAAGAAGGGAGAGAAAGCGTTGTTAACTGTGAGGCCTCAATATGGGTTTGGGGAGTCCGGTAGACCTGCGGTGGGAGAAGAAGGCGTGGTGCCTCCTAATGCCACACTTCAGATAACCCTTGAATTGGTTTCTTGGAAAACTGTTATAGACATTACCAAGGATAAGAAAGTCCTGAAGAAGACTTTAAAGGAGGGAGAAGGATATGAACAACCAAATGATGGAGCAGAGGTCCAAGTGAAACTCATCGGTAAACTAGCTGATGGGACGATCTTTGCTAAGAAGGGCGATGACGAGAAGCCTTTTGAGTTCAAAACTGATGAAGAACAAGTCATTGAAGGACTCGATTTGGCTGTGAAAAAAATGAAGAAGGGAGAAATTGCCATGGTGACTATCCATCCACAATATGCTTTTGGGTCTTCCGATTCATCTCAAGATCTTGCTGTGGTTCCTGCAAACTCAACTGTTCATTACGAAGTTGAGCTTGTCTCATTTGTCAAAGAAAAAGAATCTTGGGATCTGAAAACAGCGGAAGAGAAAATAGAAGCAGCAGGGAGAAAGAAGGAAGAAGGGAACGTATTGTTCAAAGCTGGTAAATATGCCAGAGCATCAAGCAGATATGAAAAGGCTGTGCGTTACATTGAATATGATACCTCCTTCAACGATGAGGAGAAGCAACAGTGCAAGGCACTAAAGATTTTGTGCAATCTAAACAATGCTGCTTGCCAATTGAAAGTCAAGGACTACAGACAAGCAGAGAAGCTCTGTTCAAAGGTGTTGGAACTTGACAGTAGAAATGTGAAAGCTCTATACAGAAGGGCTCAAGCATATATTCAGCTCGTTGATCTTGATCTTGCTGAGCAGGATCTCAAGAAAGCCCTTGAGATTGACCCTGAAAACAGACAAGTGAAGATCGAACTTCGACAGTTGAAAGAGAAAGTAAGGGAATACAACAAGAGAGATGCACAATTTTACGGCAACATCTTTGCAAAAATGAGCAAGTTGGAGTCGGGGAAGGCTGCCAGTTCAGCAGTGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAG 1728 44.68 MEDDFEFPSASNVDEEMDMPEDEAESPVMKVGEEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMRKGENAVFTIPPGLAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDLDEVLVHYEARREDGTLISKSDGVEFIVENGYFCPALATAVKTMKKGEKALLTVRPQYGFGESGRPAVGEEGVVPPNATLQITLELVSWKTVIDITKDKKVLKKTLKEGEGYEQPNDGAEVQVKLIGKLADGTIFAKKGDDEKPFEFKTDEEQVIEGLDLAVKKMKKGEIAMVTIHPQYAFGSSDSSQDLAVVPANSTVHYEVELVSFVKEKESWDLKTAEEKIEAAGRKKEEGNVLFKAGKYARASSRYEKAVRYIEYDTSFNDEEKQQCKALKILCNLNNAACQLKVKDYRQAEKLCSKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDLKKALEIDPENRQVKIELRQLKEKVREYNKRDAQFYGNIFAKMSKLESGKAASSAVKQEAVPMTIDSKA 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10409223 10412914 - Cp4.1LG03g12240.1 Cpe03g01284 467001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01284 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755
Cpe03g01284 575 SUPERFAMILY FKBP-like 151 265 - -
Cpe03g01284 575 MobiDBLite consensus disorder prediction 1 30 - -
Cpe03g01284 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 380 IPR001179 GO:0003755
Cpe03g01284 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 171 261 IPR001179 GO:0003755
Cpe03g01284 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 144 IPR001179 GO:0003755
Cpe03g01284 575 SUPERFAMILY FKBP-like 270 397 - -
Cpe03g01284 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755
Cpe03g01284 575 SMART tpr_5 401 434 IPR019734 GO:0005515
Cpe03g01284 575 SMART tpr_5 484 517 IPR019734 GO:0005515
Cpe03g01284 575 SMART tpr_5 450 483 IPR019734 GO:0005515
Cpe03g01284 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 276 383 - -
Cpe03g01284 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 19 271 - -
Cpe03g01284 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 383 560 - -
Cpe03g01284 575 Gene3D - 151 264 IPR046357 GO:0003755
Cpe03g01284 575 Coils Coil 517 537 - -
Cpe03g01284 575 Gene3D Tetratricopeptide repeat domain 386 544 IPR011990 GO:0005515
Cpe03g01284 575 SUPERFAMILY TPR-like 395 549 IPR011990 GO:0005515
Cpe03g01284 575 SUPERFAMILY FKBP-like 27 158 - -
Cpe03g01284 575 Gene3D - 265 385 IPR046357 GO:0003755
Cpe03g01284 575 Gene3D - 30 150 IPR046357 GO:0003755
Cpe03g01284 575 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Cpe03g01284 575 MobiDBLite consensus disorder prediction 1 22 - -
Cpe03g01284 575 PANTHER PEPTIDYLPROLYL ISOMERASE 383 560 - -
Cpe03g01284 575 PANTHER PEPTIDYLPROLYL ISOMERASE 19 271 - -
Cpe03g01284 575 PANTHER PEPTIDYLPROLYL ISOMERASE 276 383 - -
Cpe03g01284 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Cpe03g01284 575 Pfam Tetratricopeptide repeat 484 517 IPR001440 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01573 Cpe-Chr2:13293041 Cpe03g01284 Cpe-Chr3:10409223 4.45E-09 dispersed
Cpe03g01284 Cpe-Chr3:10409223 Cpe17g01127 Cpe-Chr17:8551303 0 dispersed
Cpe07g00692 Cpe-Chr7:5789875 Cpe03g01284 Cpe-Chr3:10409223 7.69E-15 dispersed
Cpe17g01128 Cpe-Chr17:8559352 Cpe03g01284 Cpe-Chr3:10409223 2.05E-11 dispersed
Cpe03g01284 Cpe-Chr3:10409223 Cpe12g01106 Cpe-Chr12:9151197 9.77E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01284 K09571 - csv:101210041 999.579