Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01300 | ATGAGAGTTGGGAAGTATGAGTTGGGGAAGACTCTTGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGATATCCGTACCGGTCGCCGTTACGCTGTCAAGATCCTCGACAAGACTAGGATTCTCCGTCTCAACTTCTCTGACCAGATTAAGCGTGAAATAAGTACTCTCAAGCTCCTTAGGCATCCGAATGTTGTAAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAAGATGGTTTGCTGCACACTACCTGTGGAAGCCCCAACTATGTTGCACCAGAGGTTCTTGCTAACAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATTTTGTATGTCATTCTTACGGCCTGTCTTCCATTCGACGAGACCAATCTATCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCGGCAGGTGCCAGAAAGTTGATAGGGAGAACTCTTGACCCCAATCCCAACACACGCATTACAGTAGCAGGAATTAAAGAGAATGAGTGGTTCAAGACCGACTATAATCCTGCTTCTCCTTGTTATGAGGATGAGGAGGAGGGTCCACTTGATGATCAGGAGGATGCCATCTCAACGCCTGATGAGCCATCTGACGTCGAAAACAGCCCAAAATCACCATCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTAGATCTGTCTGGTTTCTTTGAGCAAGAGGATGTTTCCGAGAGGAAGATCAGATTTACATCCAACCATTCGGCCAAGGACTTGCTAGAGAGAATCGAAATTATCGCAACGGATATGGGATTTCGAGTCCAAAAGAAAAGTGGAAAGTTGAAAGTGATGCAAGAGGTAAGATGCCAAAGAAGCCTAAGTAATCTATCATTTGTGGCAGAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCAGAGCTGGAACGGCATAATTCAAGCTCCTTAGCATTAAACAGTACATGTTAG | 1062 | 44.16 | MRVGKYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTRILRLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIEDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLSLLYKKTLRGDFQIPKWLSAGARKLIGRTLDPNPNTRITVAGIKENEWFKTDYNPASPCYEDEEEGPLDDQEDAISTPDEPSDVENSPKSPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEVRCQRSLSNLSFVAELCERLSNDLGTNPELERHNSSSLALNSTC | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10556643 | 10560168 | - | Cp4.1LG03g12070.1 | Cpe03g01300 | 467017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01300 | 353 | Pfam | NAF domain | 240 | 299 | IPR004041 | GO:0007165 | |
Cpe03g01300 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 95 | - | - | |
Cpe03g01300 | 353 | ProSiteProfiles | NAF domain profile. | 238 | 262 | IPR018451 | GO:0007165 | |
Cpe03g01300 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 242 | - | - | |
Cpe03g01300 | 353 | MobiDBLite | consensus disorder prediction | 207 | 228 | - | - | |
Cpe03g01300 | 353 | Pfam | Protein kinase domain | 6 | 96 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01300 | 353 | Pfam | Protein kinase domain | 100 | 198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01300 | 353 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 1 | 96 | - | - | |
Cpe03g01300 | 353 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 | |
Cpe03g01300 | 353 | Gene3D | Kinase associated domain 1, KA1 | 243 | 332 | - | - | |
Cpe03g01300 | 353 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 96 | 327 | - | - | |
Cpe03g01300 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 211 | IPR011009 | - | |
Cpe03g01300 | 353 | ProSiteProfiles | Protein kinase domain profile. | 6 | 198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01300 | 353 | PANTHER | - | 96 | 327 | - | - | |
Cpe03g01300 | 353 | PANTHER | - | 1 | 96 | - | - | |
Cpe03g01300 | 353 | MobiDBLite | consensus disorder prediction | 203 | 238 | - | - | |
Cpe03g01300 | 353 | CDD | CIPK_C | 244 | 324 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01300 | Cpe08g00128 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01300 | Cpe-Chr3:10556643 | Cpe08g00617 | Cpe-Chr8:4069686 | 3.98E-89 | dispersed | |
Cpe11g00492 | Cpe-Chr11:2848443 | Cpe03g01300 | Cpe-Chr3:10556643 | 3.37E-42 | dispersed | |
Cpe12g00350 | Cpe-Chr12:2366003 | Cpe03g01300 | Cpe-Chr3:10556643 | 4.44E-95 | wgd | |
Cpe03g01300 | Cpe-Chr3:10556643 | Cpe08g00128 | Cpe-Chr8:840252 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62302 | PF00069 | Pkinase | 9.90E-18 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01300 | K07198 | - | csv:101205987 | 557.37 |