Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01300 ATGAGAGTTGGGAAGTATGAGTTGGGGAAGACTCTTGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGATATCCGTACCGGTCGCCGTTACGCTGTCAAGATCCTCGACAAGACTAGGATTCTCCGTCTCAACTTCTCTGACCAGATTAAGCGTGAAATAAGTACTCTCAAGCTCCTTAGGCATCCGAATGTTGTAAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAAGATGGTTTGCTGCACACTACCTGTGGAAGCCCCAACTATGTTGCACCAGAGGTTCTTGCTAACAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATTTTGTATGTCATTCTTACGGCCTGTCTTCCATTCGACGAGACCAATCTATCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCGGCAGGTGCCAGAAAGTTGATAGGGAGAACTCTTGACCCCAATCCCAACACACGCATTACAGTAGCAGGAATTAAAGAGAATGAGTGGTTCAAGACCGACTATAATCCTGCTTCTCCTTGTTATGAGGATGAGGAGGAGGGTCCACTTGATGATCAGGAGGATGCCATCTCAACGCCTGATGAGCCATCTGACGTCGAAAACAGCCCAAAATCACCATCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTAGATCTGTCTGGTTTCTTTGAGCAAGAGGATGTTTCCGAGAGGAAGATCAGATTTACATCCAACCATTCGGCCAAGGACTTGCTAGAGAGAATCGAAATTATCGCAACGGATATGGGATTTCGAGTCCAAAAGAAAAGTGGAAAGTTGAAAGTGATGCAAGAGGTAAGATGCCAAAGAAGCCTAAGTAATCTATCATTTGTGGCAGAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCAGAGCTGGAACGGCATAATTCAAGCTCCTTAGCATTAAACAGTACATGTTAG 1062 44.16 MRVGKYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTRILRLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIEDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLSLLYKKTLRGDFQIPKWLSAGARKLIGRTLDPNPNTRITVAGIKENEWFKTDYNPASPCYEDEEEGPLDDQEDAISTPDEPSDVENSPKSPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEVRCQRSLSNLSFVAELCERLSNDLGTNPELERHNSSSLALNSTC 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10556643 10560168 - Cp4.1LG03g12070.1 Cpe03g01300 467017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01300 353 Pfam NAF domain 240 299 IPR004041 GO:0007165
Cpe03g01300 353 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Cpe03g01300 353 ProSiteProfiles NAF domain profile. 238 262 IPR018451 GO:0007165
Cpe03g01300 353 Gene3D Transferase(Phosphotransferase) domain 1 96 242 - -
Cpe03g01300 353 MobiDBLite consensus disorder prediction 207 228 - -
Cpe03g01300 353 Pfam Protein kinase domain 6 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01300 353 Pfam Protein kinase domain 100 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01300 353 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 96 - -
Cpe03g01300 353 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Cpe03g01300 353 Gene3D Kinase associated domain 1, KA1 243 332 - -
Cpe03g01300 353 PANTHER CBL-INTERACTING PROTEIN KINASE 21 96 327 - -
Cpe03g01300 353 SUPERFAMILY Protein kinase-like (PK-like) 3 211 IPR011009 -
Cpe03g01300 353 ProSiteProfiles Protein kinase domain profile. 6 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01300 353 PANTHER - 96 327 - -
Cpe03g01300 353 PANTHER - 1 96 - -
Cpe03g01300 353 MobiDBLite consensus disorder prediction 203 238 - -
Cpe03g01300 353 CDD CIPK_C 244 324 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01300 Cpe08g00128 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01300 Cpe-Chr3:10556643 Cpe08g00617 Cpe-Chr8:4069686 3.98E-89 dispersed
Cpe11g00492 Cpe-Chr11:2848443 Cpe03g01300 Cpe-Chr3:10556643 3.37E-42 dispersed
Cpe12g00350 Cpe-Chr12:2366003 Cpe03g01300 Cpe-Chr3:10556643 4.44E-95 wgd
Cpe03g01300 Cpe-Chr3:10556643 Cpe08g00128 Cpe-Chr8:840252 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62302 PF00069 Pkinase 9.90E-18 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01300 K07198 - csv:101205987 557.37