Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g01321 | ATGGCGTCGTCTATGATTCTAAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAGAAGAAGAAGAAAGCGGCGAGGGAAAATGATCGTCAAGGTCAGGATCACATCCAGTGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTTCCGAGTCGGCACCAAACGAGACTCCGCGCCGCGGCCGAGCTGTGCGGGAGGCGTCTGATACAGTTCTTGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTCAAGCTCAAGTTTCGAAAGCACAACCGGCAGAAGGCTCATGCGACTGGAAACAGCCGAACGAAGAAGCCGCGAGTTAGCGTTTTCCGGTTGAGAGGAAAGGGATTACCAACTTTACAGAGTAAAGCTCGGCTTCTCGGCCGGCTGGTCCCCGGCTGCAGAAAGCAACCGCTGCCGGTGATTCTGGATGAAGTAACCGATTACATACCCGCTCTGGAAATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTATGGATTCTTCCATCTCCCCACCTTCTACCTGA | 651 | 51.92 | MASSMILNPVASSERSRDSSRKKKKKKAARENDRQGQDHIQWKSQAQHQVYSSKLLRALSQVRISSSESAPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKAHATGNSRTKKPRVSVFRLRGKGLPTLQSKARLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSSSSSSSGMDSSISPPST | 216 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 10747008 | 10747658 | - | Cp4.1LG03g11920.1 | Cpe03g01321 | 467038 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g01321 | 216 | MobiDBLite | consensus disorder prediction | 64 | 85 | - | - | |
| Cpe03g01321 | 216 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 208 | IPR044660 | GO:0006355 | |
| Cpe03g01321 | 216 | MobiDBLite | consensus disorder prediction | 195 | 216 | - | - | |
| Cpe03g01321 | 216 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cpe03g01321 | 216 | CDD | bHLH_AtIBH1_like | 137 | 190 | IPR044549 | GO:0006355 | |
| Cpe03g01321 | 216 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 208 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g01321 | Cpe-Chr3:10747008 | Cpe18g00019 | Cpe-Chr18:326926 | 2.90E-46 | dispersed | |
| Cpe12g00330 | Cpe-Chr12:2174973 | Cpe03g01321 | Cpe-Chr3:10747008 | 1.24E-78 | wgd | |
| Cpe17g00075 | Cpe-Chr17:429216 | Cpe03g01321 | Cpe-Chr3:10747008 | 2.73E-76 | wgd | |
| Cpe03g01321 | Cpe-Chr3:10747008 | Cpe08g00146 | Cpe-Chr8:956328 | 2.43E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g01321 | - | - | cpep:111791819 | 350.132 |