Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01343 ATGGCCGTCGCCGTCGCTGATCTGATCTTCTTAATCATCTTAACGACCATACCATTTTCGATTTCGCAGCCAACTGAGAAAGCTCCGCCTCCCGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAGCCAAGCTTCCCCCAAATCTCACTGTTCTGGCACGGCAGCCGTACCGATTCGAGTCCACTCTCTCGATTCTCAACAACGGTCTTCAGGAGCTCAAGTCTTGGAAGGTTTATGTAGGGTTTCAACACGATGAGTTCTTGGTTTCGGCCTCCGGCGCCGTCCTCGCCGATGGTAATTCTATCCCTGGTAACGTTGGTAATGGGACCGTCTTTGCTGGTTTTCCGATGAGCAACTTGAAGACGGCCATTGAAACTGCTGGGGATTTCACTCAGATGCAGGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGTTGCCCCTCCCAATAATCCGATGCCTTCCAACATATCTCTTGCCAATGATGGATATCTCTGCACTAAGCCAATTCTACAAGGAAAGAGTGAAATGCACGTCTGTTGCTCACCCGATCCACGCGTTAAAACAAACATCACAACCAGTGAAGAGTTCTTAGCTCCTCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGAACATATGATTCAAGTTACTGGGCACAAGTCACAATTTCTAACCACAATCCTCTTGGTCGTCTTGATTATTGGAAATTGAGCTGGGATTGGATGAGGGATGAGTTTATCTATTCAATGAAAGGTGCTTACCCTTCTGTTGTTGATTCTACTGAATGCATTTTTGGTAGACAAGGCACTTATTATAAGGATTTAGACTTTTTCAATGTATTAAGTTGTAAAAGAAGGCCTACCATTGTTGATTTACCTCCAACTAAGGCTAACGACACCACTCTCGGGTTGATCCCGTTCTGTTGTCGAAACGGGACGATCTTGCCATTGCATATGGACCCGAGCAAGTCGATTTCTGCATTTCAGATGCAAGTGTTCAAAATGCCACCAGATCTTAATAGATCTCAGATTATACCACCTCAAAATTGGCAGATTAGTGGCGTTCTTAACCCAACATATAAATGTGGTCAGCCAGTGAGAGTAAGTCCTAGCGAATTCCCTGACTCGAGCGGTTTACTGTTGAATTCGACTGCAGTGGCTAGTTGGCAGATTGTTTGCAATATTACACATGTAAAGAAGGACATCCCAAAGTGCTGTGTTTCGTTTTCGTCGTACTACAATGAATCTGTCATCCCGTGCAGAACGTGTGCTTGTGGATGTTCGGTTAACTCTGCTCGTACATGTAATGCTACCTCCCCTGCAATGCTACTCCCAGCTGAAGCTCTTCTTGTTCCTTTTGAGAATAGGACTGCTATGGCTGTTGCTTGGGCTGGTCTTAAACATTTCCCGGTTCCGAACCCGATGCCTTGTTCGGATAACTGCGGTGTTAGTATCAACTGGCATTTGTATACCGATTATAGAGACGGATGGAGTGCGAGGATCACTCTCTTCAACTGGGGCGAAGTGAACTTTGCAGATTGGTTTGCTGCAGTTCAGATGAACAAAGCAGCACCTGGCTTCCAAGCAATGTACTCGTTCAACGCAACGACCTTGGAATTGGATGGTTCGAACAGTACTATCTTTATGCAGGGTCATCCCGGACTAAACTATCTCGTCGGAGAAACAGATGGAGTGAACCCAGCTAAGGATCCGCGCGTACCTGGAAAACAGCAATCTGTAATCTCATTCACAAAGAACATACAAGGTCTTAACATGGCTGCCGGAGATGGGTTCCCCACCAAGGTGTTCTTCAATGGGGAGGAATGCTCACTTCCTAAAATACTCCCCGCCAACAACAGCCGAAGAAACTTAGCTCGGTTCATTCCGAGCCTCCTAATGCTAGGATTCGTGTTCTTGTTCATACAGCAATAG 1956 46.11 MAVAVADLIFLIILTTIPFSISQPTEKAPPPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNNGLQELKSWKVYVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFAGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNISLANDGYLCTKPILQGKSEMHVCCSPDPRVKTNITTSEEFLAPQNGDLTIMYDVTRTYDSSYWAQVTISNHNPLGRLDYWKLSWDWMRDEFIYSMKGAYPSVVDSTECIFGRQGTYYKDLDFFNVLSCKRRPTIVDLPPTKANDTTLGLIPFCCRNGTILPLHMDPSKSISAFQMQVFKMPPDLNRSQIIPPQNWQISGVLNPTYKCGQPVRVSPSEFPDSSGLLLNSTAVASWQIVCNITHVKKDIPKCCVSFSSYYNESVIPCRTCACGCSVNSARTCNATSPAMLLPAEALLVPFENRTAMAVAWAGLKHFPVPNPMPCSDNCGVSINWHLYTDYRDGWSARITLFNWGEVNFADWFAAVQMNKAAPGFQAMYSFNATTLELDGSNSTIFMQGHPGLNYLVGETDGVNPAKDPRVPGKQQSVISFTKNIQGLNMAAGDGFPTKVFFNGEECSLPKILPANNSRRNLARFIPSLLMLGFVFLFIQQ 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10899780 10904421 + Cp4.1LG03g11650.1 Cpe03g01343 467060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01343 651 PANTHER COBRA-LIKE PROTEIN 7 9 649 - -
Cpe03g01343 651 PANTHER COBRA-LIKE PROTEIN 7 9 649 - -
Cpe03g01343 651 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01343 Cpe08g00164 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00854 Cpe-Chr1:5055397 Cpe03g01343 Cpe-Chr3:10899780 6.32E-13 dispersed
Cpe03g01343 Cpe-Chr3:10899780 Cpe04g01449 Cpe-Chr4:11570360 6.30E-38 dispersed
Cpe03g01343 Cpe-Chr3:10899780 Cpe08g00164 Cpe-Chr8:1061672 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01343 - - csv:101209258 1199.88