Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01365 ATGGCGTGTGTTCTGGATTTTGTGGCGGCTGCGCGGCGTTCATATACTATGCTTCACGAAGCTTCAACAAAACATGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGGTAACATAGATGAAATCCGTGAGGTTTCCGACAAGTTTGAGATCCAGCCTGGACTTCAAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCTACCCTAGCAAACACAAATATATGCAATGGGTTAATAGGAGAAGAAATTCTTCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCCACGTCGATGCAGAGTAGTCTGTCAAACTTAAGCTGCAGTCCATCTACCCCAACATCTGAATATGATTCATACTTATCGAAATCCATGAGTGCCCCTTTCGGAAGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGGAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAAACCATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAGCCTCCGACGGTTTGGACATGGATAATTCACATCCTCTGGATGATGGTAGCATTACTCATGAAAGATTTTGTCCTTTGAAAAACAATAGTAAAAATGCTTCAGATATCCACAGTGTATTCGAGAACCATTCATATGCCAAAGCAGGAATGGCAAACTATCCTCTGAGGCATGGGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAGCAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTCTCTGTTGGATCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTATACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGACGTGAGAGGAAATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACGGCTACATCATGATCATCCTGATGATCCGACAATCATTGTTGGTGGGAAAGTTAAAGGAAAACTAAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGTCGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCGAGTTCCTAGCCTAATAAGCCCCCCCTATGTTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTGTTTGACTTTTTTGGCAATGAGGAAGCAGTGAACCTTGTCCGTTCATATATCTTGAGCAACCCTACTGGTGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAG 1605 42.55 MACVLDFVAAARRSYTMLHEASTKHEGELEVSFGYKCNGNIDEIREVSDKFEIQPGLQRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSMQSSLSNLSCSPSTPTSEYDSYLSKSMSAPFGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNEASDGLDMDNSHPLDDGSITHERFCPLKNNSKNASDIHSVFENHSYAKAGMANYPLRHGVLDSLQRALSQAENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDVRGNGGLKAVQLTESHTVDNELERARLHHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKSKKFNDALMGILRVPSLISPPYVSTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVRSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11023353 11032533 + Cp4.1LG03g11500.1 Cpe03g01365 467082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01365 534 ProSiteProfiles PPM-type phosphatase domain profile. 155 521 IPR001932 -
Cpe03g01365 534 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 20 533 - -
Cpe03g01365 534 Coils Coil 283 303 - -
Cpe03g01365 534 Pfam Protein phosphatase 2C 254 472 IPR001932 -
Cpe03g01365 534 Gene3D - 133 530 IPR036457 -
Cpe03g01365 534 CDD PP2Cc 168 521 IPR001932 -
Cpe03g01365 534 PANTHER PROTEIN PHOSPHATASE 2C 20 533 IPR015655 GO:0004722|GO:0006470
Cpe03g01365 534 SUPERFAMILY PP2C-like 169 522 IPR036457 -
Cpe03g01365 534 SMART PP2C_4 154 519 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01365 Cpe-Chr3:11023353 Cpe05g00920 Cpe-Chr5:6041286 4.82E-70 dispersed
Cpe17g00072 Cpe-Chr17:417449 Cpe03g01365 Cpe-Chr3:11023353 6.38E-36 wgd
Cpe03g01365 Cpe-Chr3:11023353 Cpe08g00188 Cpe-Chr8:1268820 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01365 - - bhj:120073713 917.146