Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01388 | ATGGGGTGTGTTTTTGGCCGAGAGGTCTCTGCGAAGCCTGTCCAGAGAGCGGAGGCGGCGGCGGAGGAAGAGGAGGAGAGACCGAAGGCCGCTGCGGCGGCGGAGGAAATTAGGGCTTCTGCTAAACCGGAGGTTGCTCTGGCTAATGCTAATGCTAATGCTCGCAATGGTGGCTGCAGGAAGGAGGTTGAGGATCATAGAGGTTCGAGGTCGAGAGGCGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCCGGTTGGCCTGCTTGGCTCTCCGCTGTTGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGATTCTTTCGAGAAGCTTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTTATGGCTCGAGAAATTCTCATTCTACGACGTTTGGATCATCCTAATGTTGTGAAACTCGAAGGTTTAGTGACATCCCGGATGTCATGTAGTTTATATCTTGTGTTTGAATACATGGAGCACGATTTGGCTGGACTTGCTGCGAGCCCGACGATCAAGTTTACCGAACCGCAGGTTAAATGTTATATGAACCAATTGTTATCAGGGCTCGAACACTGTCACAACCGTCACGTGCTGCATCGCGATATTAAGGGATCGAATCTTCTGATTGGTAATGATGGGATCCTTAGGATAGCTGATTTCGGGTTAGCTTCCGTCTTTGATCCGAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTCGGAGCTACCGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAGGAATACTGGAAGAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACGTTTAAAGACTTCCCGTCATCGTCTCTGCCGCTAATCGAGACACTTCTTGCAATCGACCCGGATGAACGCCTGACCGCCACTGCTGCATTACATAGTGAGTTTTTCACTACCAAGCCATATGCCTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGGAGCAATGCAGATGGGGTGAAGAAATCACGGGCACGCGATCGAGCTGTTCGTGCAATTCCCGTTCCAGAAGCCAATGCTGAGCTTCAGGCCAATCTCGATCGGCGACGTCTCATTACACATGCAAATGCGAAGAGCAAGAGCGAAAAGTTTCCTCCTCCGCATCAAGATGGAGCTCTTGGCTACACTCTAGGAACTTCACATCACATCGATCCAATCTATGATCCTCCCGACGTTCCATTTAGCTCGATGAATTTCTCGTACCCGAAAGCAAACATTCATACATGGTCTGGTCCATTGATGGATCCAGCTGCTGTTGGTGCTCCAAGACGAAAAAAACACACAGCAGGGGATGGTCATTCATCGAAGTCGTCGAAGGACTTACGAAAAGATAAACACTCTGCTCGAGTCTAA | 1743 | 49.86 | MGCVFGREVSAKPVQRAEAAAEEEEERPKAAAAAEEIRASAKPEVALANANANARNGGCRKEVEDHRGSRSRGERRRRPNPRSSNPPKHVHGEQVAAGWPAWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCISETFKDFPSSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRARDRAVRAIPVPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYTLGTSHHIDPIYDPPDVPFSSMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKHSARV | 580 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11172333 | 11176001 | + | Cp4.1LG03g11320.1 | Cpe03g01388 | 467105 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01388 | 580 | MobiDBLite | consensus disorder prediction | 550 | 580 | - | - | |
Cpe03g01388 | 580 | MobiDBLite | consensus disorder prediction | 540 | 580 | - | - | |
Cpe03g01388 | 580 | SUPERFAMILY | Protein kinase-like (PK-like) | 115 | 411 | IPR011009 | - | |
Cpe03g01388 | 580 | MobiDBLite | consensus disorder prediction | 17 | 33 | - | - | |
Cpe03g01388 | 580 | PANTHER | CELL DIVISION PROTEIN KINASE | 67 | 562 | - | - | |
Cpe03g01388 | 580 | ProSitePatterns | Protein kinases ATP-binding region signature. | 128 | 151 | IPR017441 | GO:0005524 | |
Cpe03g01388 | 580 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 242 | 254 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe03g01388 | 580 | ProSiteProfiles | Protein kinase domain profile. | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01388 | 580 | PANTHER | OS01G0367700 PROTEIN | 67 | 562 | - | - | |
Cpe03g01388 | 580 | MobiDBLite | consensus disorder prediction | 486 | 507 | - | - | |
Cpe03g01388 | 580 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 204 | - | - | |
Cpe03g01388 | 580 | CDD | STKc_CDK9_like | 122 | 406 | - | - | |
Cpe03g01388 | 580 | Pfam | Protein kinase domain | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01388 | 580 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Cpe03g01388 | 580 | Gene3D | Transferase(Phosphotransferase) domain 1 | 205 | 445 | - | - | |
Cpe03g01388 | 580 | SMART | serkin_6 | 122 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01388 | Cpe08g00215 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01045 | Cpe-Chr2:9640923 | Cpe03g01388 | Cpe-Chr3:11172333 | 2.49E-177 | dispersed | |
Cpe03g01388 | Cpe-Chr3:11172333 | Cpe11g00928 | Cpe-Chr11:7792142 | 0 | dispersed | |
Cpe20g00057 | Cpe-Chr20:281924 | Cpe03g01388 | Cpe-Chr3:11172333 | 0 | dispersed | |
Cpe04g00238 | Cpe-Chr4:2917641 | Cpe03g01388 | Cpe-Chr3:11172333 | 0 | transposed | |
Cpe06g00953 | Cpe-Chr6:8147210 | Cpe03g01388 | Cpe-Chr3:11172333 | 1.75E-130 | transposed | |
Cpe07g00932 | Cpe-Chr7:8358737 | Cpe03g01388 | Cpe-Chr3:11172333 | 0 | transposed | |
Cpe19g00555 | Cpe-Chr19:4689170 | Cpe03g01388 | Cpe-Chr3:11172333 | 5.72E-147 | transposed | |
Cpe03g01388 | Cpe-Chr3:11172333 | Cpe08g00215 | Cpe-Chr8:1430904 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62303 | PF00069 | Pkinase | 2.60E-68 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01388 | K08819 | - | csv:101217952 | 1030.39 |