Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01388 ATGGGGTGTGTTTTTGGCCGAGAGGTCTCTGCGAAGCCTGTCCAGAGAGCGGAGGCGGCGGCGGAGGAAGAGGAGGAGAGACCGAAGGCCGCTGCGGCGGCGGAGGAAATTAGGGCTTCTGCTAAACCGGAGGTTGCTCTGGCTAATGCTAATGCTAATGCTCGCAATGGTGGCTGCAGGAAGGAGGTTGAGGATCATAGAGGTTCGAGGTCGAGAGGCGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCCGGTTGGCCTGCTTGGCTCTCCGCTGTTGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGATTCTTTCGAGAAGCTTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTTATGGCTCGAGAAATTCTCATTCTACGACGTTTGGATCATCCTAATGTTGTGAAACTCGAAGGTTTAGTGACATCCCGGATGTCATGTAGTTTATATCTTGTGTTTGAATACATGGAGCACGATTTGGCTGGACTTGCTGCGAGCCCGACGATCAAGTTTACCGAACCGCAGGTTAAATGTTATATGAACCAATTGTTATCAGGGCTCGAACACTGTCACAACCGTCACGTGCTGCATCGCGATATTAAGGGATCGAATCTTCTGATTGGTAATGATGGGATCCTTAGGATAGCTGATTTCGGGTTAGCTTCCGTCTTTGATCCGAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTCGGAGCTACCGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAGGAATACTGGAAGAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATATCAGAGACGTTTAAAGACTTCCCGTCATCGTCTCTGCCGCTAATCGAGACACTTCTTGCAATCGACCCGGATGAACGCCTGACCGCCACTGCTGCATTACATAGTGAGTTTTTCACTACCAAGCCATATGCCTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGGAGCAATGCAGATGGGGTGAAGAAATCACGGGCACGCGATCGAGCTGTTCGTGCAATTCCCGTTCCAGAAGCCAATGCTGAGCTTCAGGCCAATCTCGATCGGCGACGTCTCATTACACATGCAAATGCGAAGAGCAAGAGCGAAAAGTTTCCTCCTCCGCATCAAGATGGAGCTCTTGGCTACACTCTAGGAACTTCACATCACATCGATCCAATCTATGATCCTCCCGACGTTCCATTTAGCTCGATGAATTTCTCGTACCCGAAAGCAAACATTCATACATGGTCTGGTCCATTGATGGATCCAGCTGCTGTTGGTGCTCCAAGACGAAAAAAACACACAGCAGGGGATGGTCATTCATCGAAGTCGTCGAAGGACTTACGAAAAGATAAACACTCTGCTCGAGTCTAA 1743 49.86 MGCVFGREVSAKPVQRAEAAAEEEEERPKAAAAAEEIRASAKPEVALANANANARNGGCRKEVEDHRGSRSRGERRRRPNPRSSNPPKHVHGEQVAAGWPAWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCISETFKDFPSSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRARDRAVRAIPVPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYTLGTSHHIDPIYDPPDVPFSSMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKHSARV 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11172333 11176001 + Cp4.1LG03g11320.1 Cpe03g01388 467105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01388 580 MobiDBLite consensus disorder prediction 550 580 - -
Cpe03g01388 580 MobiDBLite consensus disorder prediction 540 580 - -
Cpe03g01388 580 SUPERFAMILY Protein kinase-like (PK-like) 115 411 IPR011009 -
Cpe03g01388 580 MobiDBLite consensus disorder prediction 17 33 - -
Cpe03g01388 580 PANTHER CELL DIVISION PROTEIN KINASE 67 562 - -
Cpe03g01388 580 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Cpe03g01388 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Cpe03g01388 580 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01388 580 PANTHER OS01G0367700 PROTEIN 67 562 - -
Cpe03g01388 580 MobiDBLite consensus disorder prediction 486 507 - -
Cpe03g01388 580 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Cpe03g01388 580 CDD STKc_CDK9_like 122 406 - -
Cpe03g01388 580 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01388 580 MobiDBLite consensus disorder prediction 1 94 - -
Cpe03g01388 580 Gene3D Transferase(Phosphotransferase) domain 1 205 445 - -
Cpe03g01388 580 SMART serkin_6 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01388 Cpe08g00215 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01045 Cpe-Chr2:9640923 Cpe03g01388 Cpe-Chr3:11172333 2.49E-177 dispersed
Cpe03g01388 Cpe-Chr3:11172333 Cpe11g00928 Cpe-Chr11:7792142 0 dispersed
Cpe20g00057 Cpe-Chr20:281924 Cpe03g01388 Cpe-Chr3:11172333 0 dispersed
Cpe04g00238 Cpe-Chr4:2917641 Cpe03g01388 Cpe-Chr3:11172333 0 transposed
Cpe06g00953 Cpe-Chr6:8147210 Cpe03g01388 Cpe-Chr3:11172333 1.75E-130 transposed
Cpe07g00932 Cpe-Chr7:8358737 Cpe03g01388 Cpe-Chr3:11172333 0 transposed
Cpe19g00555 Cpe-Chr19:4689170 Cpe03g01388 Cpe-Chr3:11172333 5.72E-147 transposed
Cpe03g01388 Cpe-Chr3:11172333 Cpe08g00215 Cpe-Chr8:1430904 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62303 PF00069 Pkinase 2.60E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01388 K08819 - csv:101217952 1030.39