Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01405 ATTTGGTTCTTGAACAATGAGAATCTTAGAAGAGGTTTTCTTGCAAGAAACTCGTTCTTGCACGAATTTGGTTCTTGGGAGAGCCGTAGTTTCTTTTTCGATTTGTTTGCATTGGAATCCATGGGTTGTGTTCTTGGAAAGTGTTTAACTTCCAGTCGCTACCCGCGGCCTTCTGACGGCGATATGACCCAATCCTGCGATGCTCCGCCGTGTAGTTTAGAAGGAAAACATGTACTAACGGGAAGGTTATTGGAGTCTGTTCGTGTGCCTTCTCATAACTTCCGTTTGGAGTACTCGCTCCTGACCCAGCGCGGCTACTACCCTGATTCCCCTGATAAAGAAAACCAAGACAGCTTCTGTGTTAGTACACAAATGCGAGGTAATCCGAATATCCATTTATTTGGTGTCTTTGATGGCCATGGTCAATTCGGATCGCTGTGTTCTAATTTCGTTAAGGAGAAGATTGTGCAAATACTATGTAACGATTCTAAATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTTTTGACCTTAAATGATGAATTGCGTAGTAGTGATATTGATGATTCCATGAGCGGCACTACAGCCATTACTGCTCTTGTTCTTGGGAATACCCTTTACGTTGCCAATGTGGGCGATTCGAGGGCAGTAATGGCTGTTAGAGTTGGGAATCGAATTGTTGCCGAGGATATGTCCCATGATCAAACACCATTTAGGAAGGATGAGTGCGAGAGAGTAAAGCTGGCCGGGGCTAGGGTGTTGACCATTGATCAAATTGAAGGGCTTAAAGATCCGGATATTCAAGTATGGGGTGATGAGGAGACCGAGGGAAATGATCCTCCTCGATTGTGGTTTCCTGATAGCTTGTACCCTGGTACTGCATTTACACGGAGCGTAGGAGACAGTGCAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTAGTTGAGCTGACTCAAAACCATCTTTTCTTTGTCGTTGCAAGCGATGGAGTTTTCGAGTTCCTTACGAGCCAAGCTGTTGTTGATATGGCTGCAAGGTATACCGATCCACGGGATGCATGCTCAGCTATTGCTGGAGAATCATATAAGCTATGGCTGGATCATGAGAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCTTCTCTAGTTCAGGCGCTGCTGCAATTGTTGGGCAGAATGGACTCCGCATAAGCCATGCAAGTTCAGAGTGGGGAAGCTCGGAGGCCTTTTGCTCCATTAGAAGTGATTTCTCAGATCCACAGGTCTCTCAGCATGTGGGCTTGATGAACAGGAACACAGCAATTGCTGTTCCATCTCTGACGCAGTACCGACCATTGGAAGTGGAAGTGGGTTAA 1383 45.7 IWFLNNENLRRGFLARNSFLHEFGSWESRSFFFDLFALESMGCVLGKCLTSSRYPRPSDGDMTQSCDAPPCSLEGKHVLTGRLLESVRVPSHNFRLEYSLLTQRGYYPDSPDKENQDSFCVSTQMRGNPNIHLFGVFDGHGQFGSLCSNFVKEKIVQILCNDSKLLEDPVKAYNSAFLTLNDELRSSDIDDSMSGTTAITALVLGNTLYVANVGDSRAVMAVRVGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLKDPDIQVWGDEETEGNDPPRLWFPDSLYPGTAFTRSVGDSAAEKIGVTAVPEVSVVELTQNHLFFVVASDGVFEFLTSQAVVDMAARYTDPRDACSAIAGESYKLWLDHENRTDDITIIIVHIKGFSSSGAAAIVGQNGLRISHASSEWGSSEAFCSIRSDFSDPQVSQHVGLMNRNTAIAVPSLTQYRPLEVEVG 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11329796 11333196 - Cp4.1LG03g10990.1 Cpe03g01405 467122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01405 460 Gene3D - 88 389 IPR036457 -
Cpe03g01405 460 Pfam Protein phosphatase 2C 122 363 IPR001932 -
Cpe03g01405 460 SMART PP2C_4 93 385 IPR001932 -
Cpe03g01405 460 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 77 458 - -
Cpe03g01405 460 SUPERFAMILY PP2C-like 84 389 IPR036457 -
Cpe03g01405 460 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 77 458 - -
Cpe03g01405 460 CDD PP2Cc 113 387 IPR001932 -
Cpe03g01405 460 ProSiteProfiles PPM-type phosphatase domain profile. 97 387 IPR001932 -
Cpe03g01405 460 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01405 Cpe17g00110 CCT
Cpe03g01405 Cpe12g00239 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01405 Cpe-Chr3:11329796 Cpe18g00410 Cpe-Chr18:5284713 4.17E-139 dispersed
Cpe02g01700 Cpe-Chr2:13968874 Cpe03g01405 Cpe-Chr3:11329796 0 transposed
Cpe12g00239 Cpe-Chr12:1606039 Cpe03g01405 Cpe-Chr3:11329796 1.19E-179 wgd
Cpe17g00110 Cpe-Chr17:676117 Cpe03g01405 Cpe-Chr3:11329796 7.99E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01405 - - cmax:111480068 833.172