Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g01415 | ATGGGTATTTCATGGAGTAACAGAAGAAGAAACAACCATCTTCAAAACCCACCTCCGCCGCCGCCTCCTCCTCCTCCGCCGCCCTACCTTTCATCTTCCTCTTTCTATTTTCCATCTGAAACCCAATCTCTTTCTCCTACTCCACCACCACCGCCACCACCACCGCCGCCGCCACCGCTGCAAACCCATCATTTCACCAATTCCCACCCTCCTCTGCCGCACAGCCATCCTTACGGTCCAACTCCTCATCCTCCTGCCCCTGCGCCTCAATCCTATTACTGTTCCGGTGGGTACAATTCGTGTAATTATGGGAACTCTACGATGGGGCGTTTCAATTTTCACCCTCATTATACCAATCAGAGTAATGGGTGGCCCCAAATTCGGCCGGGCATGGGTCCGCCGATGCTTCCATCACCGCCTTTGCCTTTGGTGGAGCATCGTCAAACGAAGAAGGTTAGAAATGATGTGAATGTGCATAAGGATACTTTAAGGATTGAGGTGGATGAGCAGAACCCTGATCATCATTTGGTTTCTTTCGTTTTTGATGCTTTGTATGATGGAAGCATAACCATTCTATTCTTCGCCAAGGAAGAGCTCAACTGTAGCTTTGTTCCAGTATATCCCGATGCCTTCAAGCCAGTAAAAGTCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCTGTGGGAACTGGCTTTGACTTGGGATTTTTCGACTGCGACGACCTCTCGAAACCTTCACCTGCTGAAGACATTTTCCCTCTTGTTATATCAGCTGAGACTCGTTCGCCCTCTCAGTCTGACGACGAACGAATTGGTGAACCTCGACGAGATAACTCTCACATGCAAATCACTCAAGCTGTTTTGGAGAAGAAAAATGGTAGTCCTTTCCAAGTGAGAGTGATTAGGCAACTACTATGGATTGATGGAGTGAGATATGAATTGCGTGAGATATTCGGAATAGGGAGTTCATCGGCTGAAGGTTTCGACGATAATGACTCCGGGAAGGAGTGTTGCATGTGCACTGATTGTGCCAAGGAACTGAAGCGTCAATCCAACAAATGTCCTATTTGTCGTCAACCGATCGAAGAACTTATCGAAATCAAGATAAACAATAGCGACCCGTAA | 1131 | 47.66 | MGISWSNRRRNNHLQNPPPPPPPPPPPPYLSSSSFYFPSETQSLSPTPPPPPPPPPPPPLQTHHFTNSHPPLPHSHPYGPTPHPPAPAPQSYYCSGGYNSCNYGNSTMGRFNFHPHYTNQSNGWPQIRPGMGPPMLPSPPLPLVEHRQTKKVRNDVNVHKDTLRIEVDEQNPDHHLVSFVFDALYDGSITILFFAKEELNCSFVPVYPDAFKPVKVPFQKGPAQKFFQPVGTGFDLGFFDCDDLSKPSPAEDIFPLVISAETRSPSQSDDERIGEPRRDNSHMQITQAVLEKKNGSPFQVRVIRQLLWIDGVRYELREIFGIGSSSAEGFDDNDSGKECCMCTDCAKELKRQSNKCPICRQPIEELIEIKINNSDP | 376 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 11379203 | 11383313 | + | Cp4.1LG03g11050.1 | Cpe03g01415 | 467132 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g01415 | 376 | PANTHER | MAHOGUNIN | 340 | 375 | IPR045194 | GO:0061630 | |
| Cpe03g01415 | 376 | Pfam | Zinc finger, C3HC4 type (RING finger) | 339 | 365 | - | - | |
| Cpe03g01415 | 376 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED | 1 | 339 | - | - | |
| Cpe03g01415 | 376 | MobiDBLite | consensus disorder prediction | 262 | 281 | - | - | |
| Cpe03g01415 | 376 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED | 340 | 375 | - | - | |
| Cpe03g01415 | 376 | MobiDBLite | consensus disorder prediction | 43 | 64 | - | - | |
| Cpe03g01415 | 376 | MobiDBLite | consensus disorder prediction | 14 | 32 | - | - | |
| Cpe03g01415 | 376 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
| Cpe03g01415 | 376 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 336 | 370 | IPR013083 | - | |
| Cpe03g01415 | 376 | PANTHER | MAHOGUNIN | 1 | 339 | IPR045194 | GO:0061630 | |
| Cpe03g01415 | 376 | MobiDBLite | consensus disorder prediction | 265 | 279 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe03g01415 | Cpe08g00242 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g01415 | Cpe-Chr3:11379203 | Cpe08g01101 | Cpe-Chr8:8334004 | 2.19E-76 | dispersed | |
| Cpe03g01415 | Cpe-Chr3:11379203 | Cpe08g00242 | Cpe-Chr8:1585153 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g01415 | - | - | cmax:111479192 | 628.632 |