Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01453 | ATGGGTTCGAAAGGAAATGATATGGGGGGCACTACGATCCCAAAGGAGACACAGAACCAGGATAGAACTCCGAACTCAAAGGTGGCTGGTATGGGAAGCATTAGCAGCAAAGATATGGTATTCAGAGCAGATATGATAGATTTGAAAACCCTAGATATGCAGCTGGAGAAACACTTTAGCCGTGTTTGGTCAATGACCCAGAATCAAAGGCCAAAGGAGGAGTGGGAGATTGATTTGTCTAAGCTTGACATTCAAAAAGTTATTGCTCATGGGACTTACGGAACAGTATATAAGGGTGCATATGACAACAAAAAGGTTGCAGTGAAACTGTTGGACTGGGGGGAGGATGGTCTTGCCACTACTGCTGAAACTGCTGCTCTGCGGGCATCGTTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGAACATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGTGCTACAAATCTTAAGATTCCTTCAACTGAGGATCAAAATTCACTTCCATCTAGGGCCTGTTGTGTGGTTGTTGAGTATATTCCTTGTGGAACATTAAAACAATTATTGATAAGGCACAAGAAAAGGAAACTTCCCTTTAAGGATGTGGTTCAGTTAGCTTTGGATCTCTCCAGAGGGCTTAGCTATCTTCACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGATAGGTGCTCATAGATCTCTCAAAATTGCTGACTTTGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACCCTTGGATACATGGCCCCAGAGGTTCTTGAAGGGAAGCCATACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGGAAATTTACTGCTGCGACATGCCATACCCCGATCTTAGTTTCGTTGATGTGTCATCTGCAGTTGTTCGACAGAATCTGCGGCCCAGTATTCCGAAATGTTGCCCAAATTCTCTGGCAAATGTGATGAGGAAATGCTGGGATAGCAATCCATCCAAGCGCCCTGAAATGCATGAGGTTGTGAAAATGTTGGAAGCTATTGATACAAGTAAAGGAGGGGGGATGATTACTCGTGAGGGTTCGGCTCCATGGAGCTCTTATGAAGATTGGTTTAGAGAGAGATGTGTTGGTACTATTGCTCTAATACATCTGTTTCCTCGAAAGGTGTTTGATGGAATGCTTGAGAGAAGTGTTGTTTCGTGGACCTCCTTGATTTGTGGTTATCCTTGGACAGAATCTTCCTGGGAAGCTGTGGCTTTGTTTCTCCAAATGATCGAGGCAGGTGTTAAACCCGAATCTGTCACAATGGTGTGTGGGATATCGGCTTGTGCCAAGTTGAAAGATCTTAAACTGGCCAAGAGAATTCATGGTTACATTGATGAGACAGAAACGAGGCTTAATACTCGTATGGTCAATGTTCTTGTGGATATCTACAAGCAATGTGGAGAAGCTGGTGCTGCAAAGCGACTATATGATGAATGTGTGGATAAGAATTGGTTTTATGTGACACAATCATGTCAAACTTTGCGTGCCATGAGATATGCCTATATTGTAAGGAACATCTACTGTGATATGTTACTCGAGACAGCATTAGTTGATACGTTTGCTAGGCGTAGTGACCCTCATAGCATGATGAAAGTGTTCGACGATATGGATAGAAAAGATGCCTCGATTGACAACAGCAATGGGAATGGCAAACGAGCTACAGAATCTTACAATGAGATGCTATGGCAAGAGTTGAAACCATAG | 1785 | 43.31 | MGSKGNDMGGTTIPKETQNQDRTPNSKVAGMGSISSKDMVFRADMIDLKTLDMQLEKHFSRVWSMTQNQRPKEEWEIDLSKLDIQKVIAHGTYGTVYKGAYDNKKVAVKLLDWGEDGLATTAETAALRASFRQEVAVWHKLEHPNVTKFVGASMGATNLKIPSTEDQNSLPSRACCVVVEYIPCGTLKQLLIRHKKRKLPFKDVVQLALDLSRGLSYLHSKKIVHRDVKTENMLIGAHRSLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFVDVSSAVVRQNLRPSIPKCCPNSLANVMRKCWDSNPSKRPEMHEVVKMLEAIDTSKGGGMITREGSAPWSSYEDWFRERCVGTIALIHLFPRKVFDGMLERSVVSWTSLICGYPWTESSWEAVALFLQMIEAGVKPESVTMVCGISACAKLKDLKLAKRIHGYIDETETRLNTRMVNVLVDIYKQCGEAGAAKRLYDECVDKNWFYVTQSCQTLRAMRYAYIVRNIYCDMLLETALVDTFARRSDPHSMMKVFDDMDRKDASIDNSNGNGKRATESYNEMLWQELKP | 594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11593287 | 11597747 | - | Cp4.1LG03g10440.1 | Cpe03g01453 | 467170 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01453 | 594 | PANTHER | KINASE ATMRK1, PUTATIVE-RELATED | 6 | 374 | - | - | |
Cpe03g01453 | 594 | Pfam | PPR repeat | 411 | 441 | IPR002885 | - | |
Cpe03g01453 | 594 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 6 | 374 | - | - | |
Cpe03g01453 | 594 | ProSiteProfiles | Protein kinase domain profile. | 82 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01453 | 594 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 371 | - | - | |
Cpe03g01453 | 594 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 409 | 443 | IPR002885 | - | |
Cpe03g01453 | 594 | Gene3D | Tetratricopeptide repeat domain | 392 | 528 | IPR011990 | GO:0005515 | |
Cpe03g01453 | 594 | Pfam | Protein tyrosine and serine/threonine kinase | 83 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | CDD | STKc_MAP3K-like | 88 | 356 | - | - | |
Cpe03g01453 | 594 | PRINTS | Tyrosine kinase catalytic domain signature | 327 | 349 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | PRINTS | Tyrosine kinase catalytic domain signature | 283 | 305 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | PRINTS | Tyrosine kinase catalytic domain signature | 217 | 235 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | PRINTS | Tyrosine kinase catalytic domain signature | 179 | 192 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cpe03g01453 | 594 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 223 | 235 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe03g01453 | 594 | SMART | serkin_6 | 82 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe03g01453 | 594 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 356 | IPR011009 | - | |
Cpe03g01453 | 594 | MobiDBLite | consensus disorder prediction | 10 | 31 | - | - | |
Cpe03g01453 | 594 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01453 | Cpe-Chr3:11593287 | Cpe18g00839 | Cpe-Chr18:7743553 | 1.72E-171 | dispersed | |
Cpe06g00332 | Cpe-Chr6:1840373 | Cpe03g01453 | Cpe-Chr3:11593287 | 4.88E-17 | dispersed | |
Cpe03g01453 | Cpe-Chr3:11593287 | Cpe03g01454 | Cpe-Chr3:11598656 | 4.83E-102 | tandem | |
Cpe17g00866 | Cpe-Chr17:6706885 | Cpe03g01453 | Cpe-Chr3:11593287 | 1.07E-84 | wgd | |
Cpe03g01453 | Cpe-Chr3:11593287 | Cpe08g00274 | Cpe-Chr8:1762011 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62306 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-60 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01453 | - | - | csv:101218975 | 614.764 |