Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe03g01454 | ATGACAACCAAGATGTCGCAGATAAACATCCTTTTCGCTTTTGATTTTGCTTCTGCTGCTTACATTCCGACAGTGAAGATATTGGAGTGGGGGGATGGCCCTGTTTTGAGGGAATCATTTCGGCAAAAAGTTGATGCTTGGCACAAGCTTCACCATCCTAATGTTACGAAATTTGTTGGGGCTTCAACAAAAGCTGTAAGTCTTCAGATTCCTTCAAAATCAAAAGTCTCTTCAATGGATCATCAAAACGACTCCATTTCACCTACGGCTTGTTGTGTTGTTGTTGAGTATGTTCCTGGTGGGACATTAAAAGAACTGGTGATGATGAAGAAGAAAAGGAAACTTCCCTTTAAGGATGCCATTCACTTAGCTTTGGATCTCTCTAAAGGGCTTAGCTATCTACACTCCAACAACATTGTGCATCAAGATGTCAAACCTGAAAATATGTTGATAGATACTCACAAAACTCTTAAAATTGCTGATATTGGAGCTGCTCGTGTTAAAGCTCGGAATCCAAAAGATACAATTGAGAAAACTGGCACCCTTGAATACATGGCCCCAGAGATGCCATACCCCAATCGTAGTTGTGCTGAAATATCATCTGGAGTTGTTAATCAGAATCTGCGACCCAATATTCCGGCATGCTGCCCAACTTCTCTGGCAAACGTGATGAGGAAATGCTGGGATGGCAACCCATCCGAACGCCCTGCAATGCATGAGGTTGTCCAAATGTTGGAAGCTATTGATACAAGTCAGGGAGGGGGAATGGTTTCTCCTGACCATGTTCCTCGCAGCTTCTGTTTTAGGCCTTCTGGCTCGTCTCCTGGTCCGTAG | 834 | 43.65 | MTTKMSQINILFAFDFASAAYIPTVKILEWGDGPVLRESFRQKVDAWHKLHHPNVTKFVGASTKAVSLQIPSKSKVSSMDHQNDSISPTACCVVVEYVPGGTLKELVMMKKKRKLPFKDAIHLALDLSKGLSYLHSNNIVHQDVKPENMLIDTHKTLKIADIGAARVKARNPKDTIEKTGTLEYMAPEMPYPNRSCAEISSGVVNQNLRPNIPACCPTSLANVMRKCWDGNPSERPAMHEVVQMLEAIDTSQGGGMVSPDHVPRSFCFRPSGSSPGP | 277 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 11598656 | 11602903 | - | Cp4.1LG03g10470.1 | Cpe03g01454 | 467171 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe03g01454 | 277 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 245 | IPR011009 | - | |
| Cpe03g01454 | 277 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 139 | 151 | IPR008271 | GO:0004672|GO:0006468 | |
| Cpe03g01454 | 277 | PANTHER | KINASE-LIKE PROTEIN | 25 | 188 | - | - | |
| Cpe03g01454 | 277 | PANTHER | KINASE-LIKE PROTEIN | 188 | 264 | - | - | |
| Cpe03g01454 | 277 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 25 | 188 | - | - | |
| Cpe03g01454 | 277 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 256 | - | - | |
| Cpe03g01454 | 277 | Pfam | Protein kinase domain | 38 | 189 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cpe03g01454 | 277 | ProSiteProfiles | Protein kinase domain profile. | 1 | 248 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cpe03g01454 | 277 | Gene3D | Transferase(Phosphotransferase) domain 1 | 22 | 192 | - | - | |
| Cpe03g01454 | 277 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 188 | 264 | - | - | |
| Cpe03g01454 | 277 | SMART | serkin_6 | 14 | 248 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe03g01454 | Cpe08g00274 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g01454 | Cpe-Chr3:11598656 | Cpe08g00274 | Cpe-Chr8:1762011 | 6.64E-107 | dispersed | |
| Cpe03g01453 | Cpe-Chr3:11593287 | Cpe03g01454 | Cpe-Chr3:11598656 | 4.83E-102 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 62307 | PF00069 | Pkinase | 4.80E-27 | CL0016 | Cpe | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe03g01454 | - | - | cmos:111457468 | 439.884 |