Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01454 ATGACAACCAAGATGTCGCAGATAAACATCCTTTTCGCTTTTGATTTTGCTTCTGCTGCTTACATTCCGACAGTGAAGATATTGGAGTGGGGGGATGGCCCTGTTTTGAGGGAATCATTTCGGCAAAAAGTTGATGCTTGGCACAAGCTTCACCATCCTAATGTTACGAAATTTGTTGGGGCTTCAACAAAAGCTGTAAGTCTTCAGATTCCTTCAAAATCAAAAGTCTCTTCAATGGATCATCAAAACGACTCCATTTCACCTACGGCTTGTTGTGTTGTTGTTGAGTATGTTCCTGGTGGGACATTAAAAGAACTGGTGATGATGAAGAAGAAAAGGAAACTTCCCTTTAAGGATGCCATTCACTTAGCTTTGGATCTCTCTAAAGGGCTTAGCTATCTACACTCCAACAACATTGTGCATCAAGATGTCAAACCTGAAAATATGTTGATAGATACTCACAAAACTCTTAAAATTGCTGATATTGGAGCTGCTCGTGTTAAAGCTCGGAATCCAAAAGATACAATTGAGAAAACTGGCACCCTTGAATACATGGCCCCAGAGATGCCATACCCCAATCGTAGTTGTGCTGAAATATCATCTGGAGTTGTTAATCAGAATCTGCGACCCAATATTCCGGCATGCTGCCCAACTTCTCTGGCAAACGTGATGAGGAAATGCTGGGATGGCAACCCATCCGAACGCCCTGCAATGCATGAGGTTGTCCAAATGTTGGAAGCTATTGATACAAGTCAGGGAGGGGGAATGGTTTCTCCTGACCATGTTCCTCGCAGCTTCTGTTTTAGGCCTTCTGGCTCGTCTCCTGGTCCGTAG 834 43.65 MTTKMSQINILFAFDFASAAYIPTVKILEWGDGPVLRESFRQKVDAWHKLHHPNVTKFVGASTKAVSLQIPSKSKVSSMDHQNDSISPTACCVVVEYVPGGTLKELVMMKKKRKLPFKDAIHLALDLSKGLSYLHSNNIVHQDVKPENMLIDTHKTLKIADIGAARVKARNPKDTIEKTGTLEYMAPEMPYPNRSCAEISSGVVNQNLRPNIPACCPTSLANVMRKCWDGNPSERPAMHEVVQMLEAIDTSQGGGMVSPDHVPRSFCFRPSGSSPGP 277
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 11598656 11602903 - Cp4.1LG03g10470.1 Cpe03g01454 467171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01454 277 SUPERFAMILY Protein kinase-like (PK-like) 25 245 IPR011009 -
Cpe03g01454 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Cpe03g01454 277 PANTHER KINASE-LIKE PROTEIN 25 188 - -
Cpe03g01454 277 PANTHER KINASE-LIKE PROTEIN 188 264 - -
Cpe03g01454 277 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 188 - -
Cpe03g01454 277 Gene3D Transferase(Phosphotransferase) domain 1 193 256 - -
Cpe03g01454 277 Pfam Protein kinase domain 38 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01454 277 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01454 277 Gene3D Transferase(Phosphotransferase) domain 1 22 192 - -
Cpe03g01454 277 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 188 264 - -
Cpe03g01454 277 SMART serkin_6 14 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe03g01454 Cpe08g00274 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01454 Cpe-Chr3:11598656 Cpe08g00274 Cpe-Chr8:1762011 6.64E-107 dispersed
Cpe03g01453 Cpe-Chr3:11593287 Cpe03g01454 Cpe-Chr3:11598656 4.83E-102 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62307 PF00069 Pkinase 4.80E-27 CL0016 Cpe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01454 - - cmos:111457468 439.884