Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01458 ATGAAAACCTCAAGCTTCCCTCTCCCAAAATCTCTCCTCCTCATCTCCATTCTCACCCTCCTCTCCAACCCTTCATATCAAGCGACTCCCCCGCCGCCATCGCCGCCGCCGCCGCCATTTCTCCCCAACCCGAGGCTTCTCAAGGCCTACACTGCTCTCCAAGCTTGGAAACATGCCATCACTGCCGACCCAAACAACTTCACCGCTGACTGGTACGGCCCCAACGTATGCAACTACTCCGGCATTTTCTGTGCCTCCGCTCCCGACGACCCCTATATCCTCACCGTCGCCGGGATCGACCTCAACCATGCCAACCTGTCGGGCACCCTACCCGACGACCTCGGCCTCCTGACCGACCTTGCTCTGTTCCACATCAACTCCAATCGCTTCTGCGGTACTGTCCCCGAGTCCTTCCGGTGCCTCACTCGCCTATTCGAGCTCGATCTCAGCAACAATGGCTTCTCCGGCGAATTCCCTTCTGCAATTCTCTCTCTTGCTGCTCTCAAATTCCTCGATATTCGATTCAACAAATTCCATGGGGATCTCCCTTCTCCCCTGTTTGACATGAAACTCGATGCTCTGTTCATCAATAATAACGATTTCAAATTCTCCTTACCGGAAAACATCGGCAATTCCCCTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCTCCCTTCCAGTTTATCCAACATGAACAATACACTCAATGAAATTATAATCACGAATAGTGGGTTGAATGGGTGTTTGCCGCCGGAATTTGGGTCGTTGAGCAATCTCGTCGTCTTCGATGTCAGTGACAACAATCTTGTCGGACCACTGCCGGAGACGATGGCCGGAATGAAGAAATTGGAGCAGCTAAATGTCGCACATAACCAATTATCCGGTGAAATTCCGGCAAGTATTTGCTCGTTGCCAAAATTGCAGAATTTCACGTACTCGTATAATTTCTTCTGCGGTGAGCCGTCAGTGTGCCTGAAACTTCAGGCCAGCGATGACCAGAAAAATTGTTTGCCGGAAAGGCCACTGCAACGTTCGCCGGAGGAATGTAAAGCTTTCTACTCTTACTCTGTTGACTGCGGCGTCTTTGGTTGTACTCATCGGCCGCCCCCGCCGCCACCTCCTCCTCCTCCGCCCCCGCCTCCGCCTCCACCTCCGCCACCGCCACCTCCACCTCCGCCGCCGCCACCGCCACCACCGTATTATCAGTATCCATAG 1227 52.97 MKTSSFPLPKSLLLISILTLLSNPSYQATPPPPSPPPPPFLPNPRLLKAYTALQAWKHAITADPNNFTADWYGPNVCNYSGIFCASAPDDPYILTVAGIDLNHANLSGTLPDDLGLLTDLALFHINSNRFCGTVPESFRCLTRLFELDLSNNGFSGEFPSAILSLAALKFLDIRFNKFHGDLPSPLFDMKLDALFINNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSLSNMNNTLNEIIITNSGLNGCLPPEFGSLSNLVVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCGEPSVCLKLQASDDQKNCLPERPLQRSPEECKAFYSYSVDCGVFGCTHRPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYYQYP 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11620680 11621906 - Cp4.1LG03g10380.1 Cpe03g01458 467175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01458 408 Gene3D Ribonuclease Inhibitor 211 337 IPR032675 -
Cpe03g01458 408 MobiDBLite consensus disorder prediction 370 408 - -
Cpe03g01458 408 Pfam Leucine rich repeat N-terminal domain 51 84 IPR013210 -
Cpe03g01458 408 SUPERFAMILY L domain-like 49 330 - -
Cpe03g01458 408 Pfam Leucine rich repeat 238 297 IPR001611 GO:0005515
Cpe03g01458 408 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 21 378 - -
Cpe03g01458 408 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 378 - -
Cpe03g01458 408 Gene3D Ribonuclease Inhibitor 48 210 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01458 Cpe08g00278 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01458 Cpe-Chr3:11620680 Cpe11g01106 Cpe-Chr11:9219685 1.07E-147 dispersed
Cpe12g00384 Cpe-Chr12:2744480 Cpe03g01458 Cpe-Chr3:11620680 1.05E-89 dispersed
Cpe03g01458 Cpe-Chr3:11620680 Cpe08g00278 Cpe-Chr8:1792592 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01458 - - cmos:111457817 696.812