Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01482 ATGAAACCAGGGCTCCGGCCCACTCCGGCTGCAGTTCCGCGATCTGCCGGCACCACCCTTCTCGGGAAGTACGGCTTAGGCCGTCTTCTCGGCCGTGGAAGCTTCGCCAAAGTCTACCAAGCAGTTTCCTTAGCCGATAATTCCATCGTCGCCGTCAAAATTATCGACAAATCCAAAACCGTCGGCGCAACCCTTGAACGATGTATAGTCCGGGAGATCGCCGCCATGCGCCGACTCGATCACCACCCAAACATTCTGAAAATCCACGAAGTCATGGCCACCAAGTCCAAAATCTACCTGGTGGTCGAATTCGCCGCCGGAGGCGAACTCTTGGCGAAAATCTCCCGACGTGGACGTTTCACGGAAACCGTTGCTCGCCGGTACTTTCAACAACTCGTCTCGGCCCTGAAATTCTGCCATGAAAATGGCGTTGTTCACCGCGATGTGAAACCGCAGAATCTTTTGCTAGACGAACAGGGCAATTTGAAAATCTCCGATTTTGGACTCTCTGCTTTACCCGAAAAACTCAAAGATGAATTGCTTCACACGGCTTGCGGAACTCCGGCATACTCAGCGCCGGAGGTCATGATCCGACGCGGAAACAGGGGATATGACGGAGGAAAGGCGGACGCCTGGTCTTGTGGAGTGATTTTATTCGTAATGCTCTCTGGGTTTCTCCCTTTCGAGGAAAGTAACCTTGCGGCAATGTACAAGAAGATCCACCGTCGAGAATTTCAAATCCCTAAATGGATTTCGAAACCGGTCCGATTCTTAATTTATCACCTCCTCGATCCGAATCCCGAAACGAGGATGAGCATTGAGGCGCTAATGCAAAACCCTTGGTTCAAGAAATCGCTACCACGGAAACAGAGTAACGAGAGCCTGATGCAGTCGATGAAGAATTATCGATTGGGGAAAGAGAGGGGAATAGGGGAAATGAACGCGTTCGATATAATTTCGATGTCATCGGGGTTGGATTTATCGGGGCTGTTTGAAACGACGGAGAAGAGGGCGGAGAGGAGGTTTACGTCGAGGGCGACGGTGAGGGAGGTGGAAGAGAGGGTGAGGGAGATCGGCGGGGTGTTGGGGTATGAGGTGGAGGCGGTGGCTGTGGCGAAGGGAGGGGCGATCGGAATGGGGAAGGGGAGGGTGGTGGTGGTGGTGGAAGTGGTGGAGATGGCGGTGGCGCCGGTGACATTGACGATGGTGGAGGTGAGGGTGATAAAAGGAGGGGAGGAATTTGAAGAACTCCATTGGAGATGCTTTGAAGCTAAACTTGAAGGATTTGCTGTTCCATGGCAGATGAAATAG 1311 52.63 MKPGLRPTPAAVPRSAGTTLLGKYGLGRLLGRGSFAKVYQAVSLADNSIVAVKIIDKSKTVGATLERCIVREIAAMRRLDHHPNILKIHEVMATKSKIYLVVEFAAGGELLAKISRRGRFTETVARRYFQQLVSALKFCHENGVVHRDVKPQNLLLDEQGNLKISDFGLSALPEKLKDELLHTACGTPAYSAPEVMIRRGNRGYDGGKADAWSCGVILFVMLSGFLPFEESNLAAMYKKIHRREFQIPKWISKPVRFLIYHLLDPNPETRMSIEALMQNPWFKKSLPRKQSNESLMQSMKNYRLGKERGIGEMNAFDIISMSSGLDLSGLFETTEKRAERRFTSRATVREVEERVREIGGVLGYEVEAVAVAKGGAIGMGKGRVVVVVEVVEMAVAPVTLTMVEVRVIKGGEEFEELHWRCFEAKLEGFAVPWQMK 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11725168 11729885 + Cp4.1LG03g10330.1 Cpe03g01482 467199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01482 436 Pfam NAF domain 313 367 IPR004041 GO:0007165
Cpe03g01482 436 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Cpe03g01482 436 Gene3D Kinase associated domain 1, KA1 309 430 - -
Cpe03g01482 436 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01482 436 Gene3D Phosphorylase Kinase; domain 1 26 109 - -
Cpe03g01482 436 Gene3D Transferase(Phosphotransferase) domain 1 110 308 - -
Cpe03g01482 436 SUPERFAMILY Protein kinase-like (PK-like) 21 298 IPR011009 -
Cpe03g01482 436 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Cpe03g01482 436 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01482 436 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01482 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cpe03g01482 436 PANTHER SERINE/THREONINE KINASE 16 434 - -
Cpe03g01482 436 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 434 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01482 Cpe17g00170 CCT
Cpe03g01482 Cpe12g00166 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01482 Cpe-Chr3:11725168 Cpe05g00998 Cpe-Chr5:6530352 2.82E-124 dispersed
Cpe12g00166 Cpe-Chr12:1086048 Cpe03g01482 Cpe-Chr3:11725168 0 wgd
Cpe17g00170 Cpe-Chr17:1082441 Cpe03g01482 Cpe-Chr3:11725168 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62309 PF00069 Pkinase 3.00E-70 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01482 K12761 - csv:101217555 684.871