Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01498 ATGAAACTTTCTCGTCTAAATTCGCTCCGGCGAGTTCAGTCCGGCGAGCTCATCATGAAGTTTCCCGACGATCAAGACGAATCCAAGAGGCCCCAATTCCCTCTCGATTCTAGCTGTTACAAAATCATCGATGAAATTGGGGTCGGCGTCAGCGCCGTCGTTTACAAAGCCATTTGCATTCCCATGAACTCTGCAGTGGTGGCCATCAAAGCCATTGACCTCGATCGATCGCGAGCAGATTTCGATGACATTCGAAGAGAAGCCAAAATTCTGTCACTTCTCTCTCATCCAAACATTCTTAACGCCCACTGTTCGTTCACAGTCGATCGTCGCCTTTGGGTCGTGATGCCGTTCATGTCTGCCGGATCTTTACAGTCGATTATTACGTCGTCGTTTCCAGACGGCTTGCCTGAGCCCTGCATCGCTGTCGTTCTCCGGGAAATTCTACACGCTCTGACTTACCTCCACGACCAAGGCCACCTCCACCGCGACATTAAAGCCGGAAACATTCTGATGGACTCAAATGGGTCCGTCAAGCTAGCTGATTTCGGAGTTTCGGCATCCATTTTCGAGGCCAATTCCACACAGGGGGTGCCAATTTCTCCATCATCGACGTCGATGATGCTGAAGGAAATCGCGGGAACGCCATATTGGATGGCGCCGGAGGTGATTCACTCGCACAATGGGTATAGTTTGAAAGCGGATATATGGTCATTTGGAATCACGGCGTTGGAATTAGCCCACGGACGACCTCCCCTTTCTCATCTCCCACCTTCCAAGTCCCTCCTCCTGAAAATCACGCGAAGGTTTCGATTCTCGGATTACGAGAATCAACAAAACAGCAATAACAAGAACAAATTTTCAAAAGGGTTCAAGGAATTAGTAGCCTCATGCCTTGATCAGGAGCCATCGAGAAGACCATGCGCCGATAAATTGCTCAAACATCCCTTTTTCAGGAACTGCAAGGGCCCTGATCTTCTCATAAAGACTGTATTACAAGGTTTGCCGAGTGTCGAAGAGAGATTCAAATTGGGAAAATTGCAGCGATTACCATCGATGAAAACGGAGGAAGAAGATGAAGAGGAAATAGAGAAGGAAATTATAAAACAGAGGAGGATCAGCGGGTGGAATTTCAAGGAGGATGGGCTAGAGCTGGAGCCTGTTTTTCCAGGGGAAAACTGCGAGGAAGATGAATGTTCGATCATAAAACAGGTCCGATTCGGTGGGGAATCGATCATGGAGAAGGGTTCGAGGGATTCGAGTGAGTGCTGTTCGGGGGTATCGGATCTGAGTTCACCAACGGGGAACGGGAGGAGAGGCGAAGTGGAGGAGGAGGAGGAGGAGGGTGTTGACAGGGAGTCGATAATGGGTGGATTGGTGGCGCTGAAAAGGAGCTTGGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATAGAAGGAGAGAAAGGGGGAGAGATGAGCCGAGAGGAGCAGATAGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGCGGAAGAGGAACTTTGAATTGGAGATGGAGTTGGAATTTCTTAGGCTTCAGATCTCCGCTGCCCATAATACTGGCGCTGCTTAA 1608 49.56 MKLSRLNSLRRVQSGELIMKFPDDQDESKRPQFPLDSSCYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILHALTYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANSTQGVPISPSSTSMMLKEIAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENQQNSNNKNKFSKGFKELVASCLDQEPSRRPCADKLLKHPFFRNCKGPDLLIKTVLQGLPSVEERFKLGKLQRLPSMKTEEEDEEEIEKEIIKQRRISGWNFKEDGLELEPVFPGENCEEDECSIIKQVRFGGESIMEKGSRDSSECCSGVSDLSSPTGNGRRGEVEEEEEEGVDRESIMGGLVALKRSLDEQRRAVGSLIELIEGEKGGEMSREEQIGRLMEKMTRELENERKRNFELEMELEFLRLQISAAHNTGAA 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11812109 11813716 + Cp4.1LG03g10100.1 Cpe03g01498 467215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01498 535 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 24 532 - -
Cpe03g01498 535 SMART serkin_6 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01498 535 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01498 535 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Cpe03g01498 535 Coils Coil 491 525 - -
Cpe03g01498 535 Gene3D Transferase(Phosphotransferase) domain 1 122 370 - -
Cpe03g01498 535 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01498 535 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Cpe03g01498 535 Coils Coil 353 373 - -
Cpe03g01498 535 MobiDBLite consensus disorder prediction 421 435 - -
Cpe03g01498 535 Gene3D Phosphorylase Kinase; domain 1 28 118 - -
Cpe03g01498 535 MobiDBLite consensus disorder prediction 414 452 - -
Cpe03g01498 535 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 24 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01498 Cpe-Chr3:11812109 Cpe13g00900 Cpe-Chr13:7689434 8.76E-86 dispersed
Cpe03g01498 Cpe-Chr3:11812109 Cpe08g00913 Cpe-Chr8:7182865 1.57E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62310 PF00069 Pkinase 7.70E-59 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01498 K08835 - csv:101215648 846.269