Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01573 ATGCCTGGGGAAGTACATGGTACTTTAAGCCAACAATTATACATGGAAAGACCAAGGGCTGTTTCCGATGTCCGAATTACTGCAGATTATAGTGCAAGTGATGTTTGTGTACAGACGGGTGGGGTATTTTCTTCCCAGTTTTTGCGGGATCGAGCTGCTGTAAGAAGATTGTCTGACATGAATGATGGAGATCATCATAATCAGCAACAGAAAAAGAGAACAGGTCTTAGTTTCAGTCCGAGCAGCCAATTGGTATATGAGGATCTCAGTGGAATTCATAGACTCGAGAGAATGAATTCTGAAAGGAACAACAAGGTTTATCCTAACAACACAAGCAAATATCAGTGGGAATATAGTGCTACTGGACAAGCATCTGGTGAATACGCCGATGAAATTAACCGAGAAGTTCAATCTGGCCACACGATGCCGCCCTTGTATGCACCGGATTCACCTTGTTCATGTTATCCCCTTGGGGCTGGATTTGGAGATTTTTCTGCCAATGGCAAGATGAAATTTCTCTGTAGTTTTGGAGGTAGAATATTACCGAGGCCTAATGATGGGATGCTTAGATATGTCGGTGGAGAAACACGCATTATGTCCATTAGAAAAAACATCTCATATGAAGAACTTTCCAAAAAGACATACGCTGTCTGTAAATATGCCCACACTATAAAGTACCAGCTTCCTGGTGAAGACCTTGATTCACTAATCTCTATCTGTTCTGATGAGGATCTTCATCATTTGATTGAGGAATATCATGAGCTGGAAAATGCAGAGGGTTCTCAAAGACTTAGAATTTTTCTTGATTATTGCGAGAGCCCTACTTCTATTGAAGAAAGGGCAGTTCAACCAATTGATGTTGATTATCAATATGTTGCGGCTGTGGATGGTATGCTAGACCCAACTCTTCATAGTCCTAATTTTCGTACTGCTTCTTCACATACTACAGACTTAAAAGATGCCCATTCACCTATGCCAAATTTGGCGGAAATGCTTCCTAGACCTAGTGGGCAATTGTTAAATCCCATTCAAATCCCACGCAAGGCATTTAATCAATCACCTTTAGATTCTCCGGTTACAGTAATGCAAAAAGACTTTAAGAACGTAGATTCAACATGTGCAGAAGATGCTAGAAACTTCATTCCATTTGTTTCTGAGAAACGTCCTCGTGATATGGTTTATTATGTTGATGCAATTGGCCGTCACAATCATCTTTACCATGGTTCTCAATTGATGGATTATCATCATGAAAAATTTAGAGTGGAAACTGATGAGACATACGAAGTTCTTAATGTTCATTTCCCACGAGGCTCCAGCGTAGATTTTGAGCCTGCACCCAATTGGGGTTTAAGTGATACACATTCAGTGAAAACTATGCTCAAGGAACGGGCAGTTAACTATGAACAGCTACGCTCTGATGCGGAGTATTCGATGCAGCTAACATCTGGAACCACCCATATGGGACAAAGAATTATGCATTCACATTCTGAACCCCTACTGCAGGAACAGGATCAAAAGTCGAATCATGGAGGATTCTATCCACTGACCTCATTCAATGATTGTGATCAGTCACCTTCACTGGCAATGTCAATTTCCATGCAGGATTTGTCAACGATGTGGAAACAGAGAGTTGACGGGGTATATCAAGATGCTAAATATGAGAATCATCGAAAGGTGGCATCTGGTAGTGAAAATGAAACATATGAAGAATGCAATTTTGATGAAAAAAAGGCTAATTTCAATGGAGGCATTTATGTTCCATCACTTAATGATGACCAAAAATACAAATATTTTCAACATGTTGACTACCAACAAAATGGTTGTCTCCTCAAAGAGGTTCAAAGCTTTAGCGGCAGATTTTCTGCCGAACGAGGTCTTGAATTAGAAAATTCTGCAGACACCACGGGTGGCCCCACCCTCGTATACCATTTAGAAACAACTGCTCCAAAATATTTCGAGGAGAGCCAATATTCTACTAAGGATAAACAAACTACTTCTAATATAGTAAGCATCTACGGCCTGCAGATCATAACGGATGCAGATCTTAAAGAACTGCAAGAGTTGGGATCTGGGACGTTTGGCACAGTTTTTCATGGAAAATGGAGGGGAACAGATGTAGCTATTAAGAGAATAAACAAGAGTTGCTTCTCAGGCAGTTTTTCAGAGCAAGAACGACTGACTAGAGATTTCTGGAGAGAAGCAAAGATCCTATCGACTCTGCACCATCCAAACGTTTTGGCTTTTTATGGGGTGGTTCCTGATGGACCTGATGGAACATTGGCAACTGTAACCGAGTATATGGTAAACGGTTCGTTAAGGCATGTCCTTTTAAGGAAGGACAGGTTGCTTGATCGTCGGAAAAGGCTTATAATTGCAATGGATGCAGCTTCTGGCATGGAATATTTGCATTTGAAAAACATTATTCATTTTGATCTGAAGTGTGAAAATTTGTTAGTCAATTTGAGGGATCCTGAACGACCTGTATGCAAGGTGGGAGATTTTGGTCTATCAAGAATTAAGCGCAATACACTTGCTTCGGGAGGCATGAGTGGAACTCTTCCATGGATGGCACCAGAATTGTTAGATAGTTGCAGTTCTAAGGTCTCTGAGAAGGTTGATGTTTTCTCATTCGGTATTACAATGTGGGAGATTTTGACAGGCGAGGAGCCATATGCTACCATGCATTGCGGTGCCATCATCGGTGGAATTGTAAGTAATACTCTTAGACCGCGGATCCCGAAACGCTGTGATCCCGAATGGAAAAGGTTAATGGAAGAGTGTTGGTCTCCTGAACCTGCAGCAAGGCCATCATTCACAGAGATAACGAATAGACTTCGTAGCATGTCGGTAGCGGTTCGGATCAGAAAGAGACCAAATGTAACAAGTAGATGA 2892 41.32 MPGEVHGTLSQQLYMERPRAVSDVRITADYSASDVCVQTGGVFSSQFLRDRAAVRRLSDMNDGDHHNQQQKKRTGLSFSPSSQLVYEDLSGIHRLERMNSERNNKVYPNNTSKYQWEYSATGQASGEYADEINREVQSGHTMPPLYAPDSPCSCYPLGAGFGDFSANGKMKFLCSFGGRILPRPNDGMLRYVGGETRIMSIRKNISYEELSKKTYAVCKYAHTIKYQLPGEDLDSLISICSDEDLHHLIEEYHELENAEGSQRLRIFLDYCESPTSIEERAVQPIDVDYQYVAAVDGMLDPTLHSPNFRTASSHTTDLKDAHSPMPNLAEMLPRPSGQLLNPIQIPRKAFNQSPLDSPVTVMQKDFKNVDSTCAEDARNFIPFVSEKRPRDMVYYVDAIGRHNHLYHGSQLMDYHHEKFRVETDETYEVLNVHFPRGSSVDFEPAPNWGLSDTHSVKTMLKERAVNYEQLRSDAEYSMQLTSGTTHMGQRIMHSHSEPLLQEQDQKSNHGGFYPLTSFNDCDQSPSLAMSISMQDLSTMWKQRVDGVYQDAKYENHRKVASGSENETYEECNFDEKKANFNGGIYVPSLNDDQKYKYFQHVDYQQNGCLLKEVQSFSGRFSAERGLELENSADTTGGPTLVYHLETTAPKYFEESQYSTKDKQTTSNIVSIYGLQIITDADLKELQELGSGTFGTVFHGKWRGTDVAIKRINKSCFSGSFSEQERLTRDFWREAKILSTLHHPNVLAFYGVVPDGPDGTLATVTEYMVNGSLRHVLLRKDRLLDRRKRLIIAMDAASGMEYLHLKNIIHFDLKCENLLVNLRDPERPVCKVGDFGLSRIKRNTLASGGMSGTLPWMAPELLDSCSSKVSEKVDVFSFGITMWEILTGEEPYATMHCGAIIGGIVSNTLRPRIPKRCDPEWKRLMEECWSPEPAARPSFTEITNRLRSMSVAVRIRKRPNVTSR 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12171462 12176090 + Cp4.1LG03g18340.1 Cpe03g01573 467290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01573 963 ProSiteProfiles Protein kinase domain profile. 682 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01573 963 SMART serkin_6 682 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01573 963 ProSitePatterns Protein kinases ATP-binding region signature. 688 709 IPR017441 GO:0005524
Cpe03g01573 963 PANTHER SERINE-THREONINE PROTEIN KINASE 670 957 - -
Cpe03g01573 963 Pfam PB1 domain 188 269 IPR000270 GO:0005515
Cpe03g01573 963 Pfam Protein tyrosine and serine/threonine kinase 683 945 IPR001245 GO:0004672|GO:0006468
Cpe03g01573 963 SUPERFAMILY Protein kinase-like (PK-like) 665 944 IPR011009 -
Cpe03g01573 963 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 86 579 - -
Cpe03g01573 963 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 670 957 - -
Cpe03g01573 963 MobiDBLite consensus disorder prediction 59 78 - -
Cpe03g01573 963 PRINTS Tyrosine kinase catalytic domain signature 872 894 IPR001245 GO:0004672|GO:0006468
Cpe03g01573 963 PRINTS Tyrosine kinase catalytic domain signature 801 819 IPR001245 GO:0004672|GO:0006468
Cpe03g01573 963 PRINTS Tyrosine kinase catalytic domain signature 916 938 IPR001245 GO:0004672|GO:0006468
Cpe03g01573 963 PRINTS Tyrosine kinase catalytic domain signature 764 777 IPR001245 GO:0004672|GO:0006468
Cpe03g01573 963 SUPERFAMILY CAD & PB1 domains 185 273 - -
Cpe03g01573 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Cpe03g01573 963 Gene3D Phosphorylase Kinase; domain 1 656 769 - -
Cpe03g01573 963 SMART PB1_new 184 271 IPR000270 GO:0005515
Cpe03g01573 963 Gene3D - 190 270 - -
Cpe03g01573 963 CDD PB1_UP2 173 268 - -
Cpe03g01573 963 CDD STKc_MAP3K-like 688 945 - -
Cpe03g01573 963 PANTHER SERINE-THREONINE PROTEIN KINASE 86 579 - -
Cpe03g01573 963 Gene3D Transferase(Phosphotransferase) domain 1 770 960 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01573 Cpe08g00383 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01573 Cpe-Chr3:12171462 Cpe05g01037 Cpe-Chr5:6804613 9.17E-39 dispersed
Cpe15g00261 Cpe-Chr15:2505055 Cpe03g01573 Cpe-Chr3:12171462 7.82E-07 dispersed
Cpe03g01573 Cpe-Chr3:12171462 Cpe08g00383 Cpe-Chr8:2396973 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62314 PF07714 PK_Tyr_Ser-Thr 2.90E-62 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01573 - - cpep:111790082 1917.12