Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01631 ATGTTCCGACGTGCTTCCAGCCTTTTGGCCCGTTCTCATTTCTCTGCAAGGACTAGATCCTTCTCTGCCGATCTGCCGGCGGCCTCTTCCACCGACGATGCTTTTGTCGCCGCCTGGAAGAAGATGATCCCTAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGTCTCCTCGACCTGCTACGCCTTCTTCTATCCCTAGTAAGCTCACCGTCAATTTCGTGCTTCCCTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTCATCATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTTGCTACAATAGCAGAGTTGAAGCCAGGGGTTCTATCAGTGCATGAAGGGAACGACACAAAAAAGTACTTCGTCAGCAGTGGTTTCGCATTCATCCATGGAAACTCATACGCTGACATAATCGCTGTCGAAGCTGTACCCGTAGAGCAAATCGACGCCAGCCAAGTACAGAAGGGTCTTGCTGATTTCACCCAGAAGTTAAATTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGCATTGACGTGCACAGCGCCTTGAACGCTGCCATTACAGGATAG 603 50.25 MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDASQVQKGLADFTQKLNSASTDLEKAEAQIGIDVHSALNAAITG 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12500322 12503132 - Cp4.1LG03g17580.1 Cpe03g01631 467348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01631 200 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 82 189 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cpe03g01631 200 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 200 - -
Cpe03g01631 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cpe03g01631 200 Gene3D - 157 198 - -
Cpe03g01631 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cpe03g01631 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 200 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cpe03g01631 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Cpe03g01631 200 Coils Coil 165 185 - -
Cpe03g01631 200 Gene3D - 59 156 IPR036771 -
Cpe03g01631 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01631 Cpe08g00431 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01631 Cpe-Chr3:12500322 Cpe08g00431 Cpe-Chr8:2747294 1.22E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01631 K02134 - csv:101206104 354.369