Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01662 ATGGGAGAAGAACTGAAGCTATTCAGAACGTGGTCGACTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAGTTGAAAGGATTAGAATACGACACCGTTTACGAAGATCTGGCCAACAAGAGTCCCCAGCTTCTGGAGTACAACCCGGTCCACAAGAAGGTCCCGGTTCTGGTCCATGGCGGAAAACCGGTTGCTGAATCGCTTGTCATTCTGGAATACATCGATGAAATGTGGAAGCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCGCTGCTCGATTTTGGGCTAAATTTGGGGATGAGAAGGTTTTGGCATCTATAAGGAAAGTGCTGATGAACCAAGGGAAAGTGAGAGAGGAAGGTGTAGAAGAAGCCTCGGAGAATATGAAGCATTTGGAAGGAGAGTTGGAGGGAAAGAGGTTCTTTGGAGGGGAAGCCATTGGGTTCGTGGATATTGCACTTGGATGGCTTGCAAACATAGTGAGTGTAGTGGAGGAAGTGATTGGAGTTGAGCTCATAACCGAGCAAAGGTTTCCCCTGTTGTGGAAATGGATACACGAATTTGCTGCTGCGCCTATCATAAATGAAACCTGGCCGCCTAGAGACAAGCTTGTCGCCCGGTACCAAGCAATTGATCAAATCTCTATGAGTAAACAAGCGTAA 669 47.38 MGEELKLFRTWSTPFALRIVWALKLKGLEYDTVYEDLANKSPQLLEYNPVHKKVPVLVHGGKPVAESLVILEYIDEMWKQNPLLPQDPYQRAAARFWAKFGDEKVLASIRKVLMNQGKVREEGVEEASENMKHLEGELEGKRFFGGEAIGFVDIALGWLANIVSVVEEVIGVELITEQRFPLLWKWIHEFAAAPIINETWPPRDKLVARYQAIDQISMSKQA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12704731 12706667 + Cp4.1LG03g17360.1 Cpe03g01662 467379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01662 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Cpe03g01662 222 Gene3D Glutaredoxin 1 83 - -
Cpe03g01662 222 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Cpe03g01662 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 213 IPR010987 -
Cpe03g01662 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Cpe03g01662 222 CDD GST_N_Tau 5 78 - -
Cpe03g01662 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 213 IPR045073 -
Cpe03g01662 222 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Cpe03g01662 222 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 1 213 - -
Cpe03g01662 222 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Cpe03g01662 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cpe03g01662 222 Gene3D - 84 221 - -
Cpe03g01662 222 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
Cpe03g01662 222 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01662 Cpe-Chr3:12704731 Cpe04g01384 Cpe-Chr4:11205731 2.20E-73 dispersed
Cpe08g01131 Cpe-Chr8:8484316 Cpe03g01662 Cpe-Chr3:12704731 2.53E-08 dispersed
Cpe09g00176 Cpe-Chr9:1030360 Cpe03g01662 Cpe-Chr3:12704731 9.69E-54 dispersed
Cpe03g01661 Cpe-Chr3:12702035 Cpe03g01662 Cpe-Chr3:12704731 6.09E-71 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01662 K00799 - csv:101219529 382.104