Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01691 ATGTCTGTTACTTTGCACACCAATCTCGGAGACATCAAGTGCGAGATTTCTTGCGATGAAAACTTTTTGGCACTGTGTGCAAGTGGTTACTATGATGGAACCATATTCCACCGCAACATCAAAGGCTTTATGATACAAGGTGGAGATCCAACAGGCACGGGAAAGGGGGGAACCAGCATATGGGGTAAAAAGTTTAATGACGAGATAAGGGAGTCACTCAAGCACAATGCAAGAGGGATATTATCAATGGCTAATAGTGGAGCAAATACGAATGGAAGCCAGTTTTTTATAACATATGCAAAGCAGCCACATTTAAATGGATTATATACTGTGTTCGGCAGAGTCATTCATGGGTTTGAAGTACTTGACATCATGGAAAAGACTCAAACTGGACCGGGAGATCGTCCTCTCGCGGAGATCAGGCTCAATCGGGTGACGATACACGCTAATCCTCTTGCAGGCTAA 465 43.87 MSVTLHTNLGDIKCEISCDENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGANTNGSQFFITYAKQPHLNGLYTVFGRVIHGFEVLDIMEKTQTGPGDRPLAEIRLNRVTIHANPLAG 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12872048 12874786 - Cp4.1LG03g17090.1 Cpe03g01691 467408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01691 154 PIRSF Peptidylpro_ismrse 2 151 IPR024936 GO:0003755
Cpe03g01691 154 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 20 147 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 SUPERFAMILY Cyclophilin-like 1 151 IPR029000 -
Cpe03g01691 154 Gene3D - 1 154 IPR029000 -
Cpe03g01691 154 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 106 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 48 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 CDD Cyclophilin_PPIL3_like 1 147 - -
Cpe03g01691 154 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 31 48 IPR020892 GO:0003755|GO:0006457
Cpe03g01691 154 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 146 IPR002130 GO:0000413|GO:0003755
Cpe03g01691 154 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 153 IPR044666 -
Cpe03g01691 154 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 2 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01691 Cpe-Chr3:12872048 Cpe10g00480 Cpe-Chr10:2830884 1.41E-55 dispersed
Cpe03g01691 Cpe-Chr3:12872048 Cpe08g00494 Cpe-Chr8:3192032 5.00E-58 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01691 K12734 - nnu:104611869 306.219