Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01717 ATGGATTTATCTTGTCATATTTGGAAGCAAAATGTGTTATGTGGTAGTGAAAGAACGCATTGCAAGACGTTGGATCAGTTTGGCCTCAGATATGTGCTTAGAAGTAGAGCTCTTGATGCCAAGTTGAGTGGTGGTTCAAGAGTAATTTATAAGGTGCCTAATAAGAGAAACAGAATTGTATCTTCTAGCGATTCCATTCACTTGAGTCTGGTTTGTGGTAGCAAGTTTGATGGTGCCTTGCAAATTTCTAAGCACAAGCGATTCTTGAACTGTAACTATAATGGTAGAAAGATGGGGATGGTTCATTCAGAGTGTCAAAGCAACGATTCTTTAGCATTTATTGATGGAAATGGCAGAAATATGGAATATGTAGATACTGGTGATGAAGGATCCAGTTCTGTGCCTACTGATGGTGTAGGGTCAGCTGGTTCCAGAGAAGCCGGTGGAGAAGCAGAAGCAGTAGAAACGGTTGCACCAACTGTTGATGAGCTTAGAGAATTGCTGCAAAAGGCTATAAAAGAACTGGAAGTTGCAAGACTTAACAGTACCATGTTCGAGGAGAAGGCCCAGAAAATATCAGAAACAGCAATAGCTTTGCAAGATGAAGCAACCCATGCTAGGAATGATGTGAACTCTACTCTTGATTCTGTACAACAGATAGTGAAGGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAGGCTACCATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATAGAGTCAATGGAGCTGGCAAAAGGAGGAAATGATTTTCCGGAAACATCAATAAATAGTGAGGGGGAGATTGATGGCAAGGATGAGCAAGAAGTGTTGTTAGTTGCTCAGGAGGACATCAAAGAATGCCGGGCAAATTTGGAAAATTGTGATGCGGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACCGGTTGAATGAGTTGGCTGAAAAGGCACAATTGAATGCGTTGAAAGCTGAAGAAGATGTCGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTTAGTGATGCTGAAATAGCTTTACAGAAAGTGGAGAAATCCTTGTCAAGTTCTTTTGTCGACACTTCGGAAATCACACAGGGGTTAAATGTTATTGAAGAAGTTGAGAATGAGGATAATAAGGCAGTTCCAGAAATATCTGGTGATATTGCTGTTGAAATGGATAGAGATTTACCACTTAGTGGTGATTCCTTAGTTATTAAATCTCTACCAGGTAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATTACTTAAGTGATAGCGAGAATGGAAAATTGAGTTCAGACTCCTCTAAAGAGGTTGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAGCAAAAAAGCCGGAAACACAGAAGGATTTGACCAGAGAAGGCTCACCTGTAAATTCCCCAAAGGCTCTATTGAAAAAATCTTCTCGCTTTTTTTCAGCATCATTCTTTTCCTTTGCAGTTGATGGGACAGAGTTCACTCCAGCATTAGTCTTCCAGGGTTTCCTGGATTCCACGAAAAAGCAATTGCCAAAGCTAATTGTTGGAGCAGTACTATTCGGAGCAGGGATTGCTATCTTAGCAAATCGAGCAGAAAGGAATTCTCTTATGTTTCAGCAGCCTGGTGTTGTCACTACTAGCACCGATGAAGTTTCCTTGAATACAAAGCCTTTATTTCAACAATTAAGGAAACTTCCTAAAAGAGTGAAAAAGTTAATTGCAAAGCTTCCCCATCAAGAGGTGAATGAAGAGGAGGCTTCACTGTTAGATGTGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTACCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGATACTTGGCTGCTGGCATTTTAATTGGGCCATATGGTCTCTCCATAATTCGTCACGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGGTTTTGGTTACAGCTGTGGTGGTTGGCTTGGTTGCTCATATTGTCTGTGGGCAGGCTGGCCCAGCTGCAATCGTCATTGGAAATGGATTGGCTTTATCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGTGAGAGCACTTCACGGCATGGGCGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTGGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTCGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTGCCATAATAGCTGGTGGGCGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACTCTACTTGTCATTCTGGGAACAAGTCTACTTACTGCCAGGGCCGGACTATCAATGGCACTGGGTGCCTTTCTAGCAGGTTTACTGCTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTGGGTCTCTTCTTCATGACGGTTGGGATGTCTATCGATCCAAAACTTCTTCTATCTAACTTTCCAGTTATCATGGGATCTTTGGGACTTCTTATTGGTGGCAAGACTATATTGGTTGCCTTGGTTGGTAGACTTTTTGGCGTCTCAATTATATCTGCGTTAAGAGTTGGGCTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCGTTTGGTGAAGCTGTCAATCAGGGTATTATGTCTTCTCAACTATCCTCTTTATTATTTCTTGTTGTGGGAATTTCAATGGCCCTTACGCCGTGGCTGGCTGCTGGTGGTCAGTTAATTGCTTCTCGGTTTGAGCAGCATGATGTTCGGAGTTTATTGCCTGTTGAAAGTGAGACTGATGATTTACAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTGAGGAGAACCGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCACGGCCTTAATTTAGAGAAGGCTGGGGCTACCGCGGTAGTTCCCGAGACGTTGGAACCAAGCTTACAGTTAGCTGCTGCTGTTCTTGCTCAGGCTAAACTACCCACATCAGAGATTGCTGCAACAATTAACGAGTTTAGGTCTCGGCATTTATCCGAGCTTACCGAGCTATGTGAAGCCAGTGGAAGTTCACTCGGATACGGGTTTTCTCGAATCATGAGTAAACCGAAAGTTCAAACCTCTGATTCCTCGGACGAGAATCAAGTCACTGAAGGGACACTGGCCATATGA 3444 42.89 MDLSCHIWKQNVLCGSERTHCKTLDQFGLRYVLRSRALDAKLSGGSRVIYKVPNKRNRIVSSSDSIHLSLVCGSKFDGALQISKHKRFLNCNYNGRKMGMVHSECQSNDSLAFIDGNGRNMEYVDTGDEGSSSVPTDGVGSAGSREAGGEAEAVETVAPTVDELRELLQKAIKELEVARLNSTMFEEKAQKISETAIALQDEATHARNDVNSTLDSVQQIVKEEYAAKEAVQKATMALSLAEARLQVAIESMELAKGGNDFPETSINSEGEIDGKDEQEVLLVAQEDIKECRANLENCDAELKRLQSKKEELQKEVDRLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIALQKVEKSLSSSFVDTSEITQGLNVIEEVENEDNKAVPEISGDIAVEMDRDLPLSGDSLVIKSLPGSFSDSEDSDQPYYLSDSENGKLSSDSSKEVESGAEKSILSQAKKPETQKDLTREGSPVNSPKALLKKSSRFFSASFFSFAVDGTEFTPALVFQGFLDSTKKQLPKLIVGAVLFGAGIAILANRAERNSLMFQQPGVVTTSTDEVSLNTKPLFQQLRKLPKRVKKLIAKLPHQEVNEEEASLLDVLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLEVLVTAVVVGLVAHIVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIMGSLGLLIGGKTILVALVGRLFGVSIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELCEASGSSLGYGFSRIMSKPKVQTSDSSDENQVTEGTLAI 1147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13023869 13036224 - Cp4.1LG03g16790.1 Cpe03g01717 467434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01717 1147 MobiDBLite consensus disorder prediction 125 149 - -
Cpe03g01717 1147 MobiDBLite consensus disorder prediction 428 450 - -
Cpe03g01717 1147 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 995 1089 IPR036291 -
Cpe03g01717 1147 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1029 1147 - -
Cpe03g01717 1147 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1028 - -
Cpe03g01717 1147 MobiDBLite consensus disorder prediction 428 490 - -
Cpe03g01717 1147 Gene3D - 983 1029 - -
Cpe03g01717 1147 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1029 1147 - -
Cpe03g01717 1147 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1028 - -
Cpe03g01717 1147 Pfam Sodium/hydrogen exchanger family 679 966 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe03g01717 1147 Gene3D - 606 973 IPR038770 -
Cpe03g01717 1147 Gene3D - 1030 1111 - -
Cpe03g01717 1147 Coils Coil 161 181 - -
Cpe03g01717 1147 MobiDBLite consensus disorder prediction 1128 1147 - -
Cpe03g01717 1147 Coils Coil 281 336 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01717 Cpe08g00524 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01717 Cpe-Chr3:13023869 Cpe04g00356 Cpe-Chr4:4207737 4.41E-73 dispersed
Cpe03g01717 Cpe-Chr3:13023869 Cpe08g00524 Cpe-Chr8:3388541 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01717 - - cmo:103483290 1765.36