Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01792 ATGAAGATTGAAGATGGGTTGCGGAGTGTTGGTGGGAAGGATGAGGATAAGACAGTGGTTGCTGCTGTTTTGGGGACTCGGGCTTTTAATTACTTGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCCGTGAGGAACGAGGCGAATTTGCAGAACAAGCTGTCGGATCTGGTGGAGAGACCCAACGCTTCGAATTTTAGCTGGAACTATGCAATTTTCTGGCAACTTTCCCATTCAAATTCTGGGGACTGGGTTTTGGGATGGGGAGATGGATTGTGTAGAGATCCTAGGGAGGGAGAGGAAACGGAAGCTACACAGATTCTTAGTCTTCGGCTTGAAGACGAGAGCCAACAGAGGATGAAGAAAACAGCACTGCAGAAGCTTCACACGCTGTTTGGAGGCTCTGATGAGGACAATTACGCCCTTGGATTGGACAGAGTCACTGATACTGAGATGTTTTTTCTTGCTTCCATGTATTTCTCCTTCCCTAGTGGAGAGGGGGGCCCTGGGAAGTGTTTGGCGTCCAGGAAACATATCTGGCTTTTGGATATTCTCAATTCGCCATCGGAGTATTGTGTGAGATCGTATCTGGCAAAATCCGCCGGGATTCGGACGGTTGTTCTGGTGCCGACCGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTAGTGCAGTTGGTTAGATCATTGTTTTCATCCCAACCTTCCCTCGACCGAGTGAGGTCGTCGGCAACAATGTCCATGATGGCTGAAAGAAAAGATGAAAACACCCCATTTGCGAGTTTGGGAATTGCTGAAAGAGGAGGGGGGAATCCTAAGGTTTTTGGGCAGACTTTGAACTCGTGGAACCTGGGTCGATCTCATTTCAGAGAGAAACTGGCGATTAGGAAGATGGATGATAGGTCATGGGAAGCATGTGCCAATGGAGGTAGAATTCAGTTTCAAAGCCCCCGAAATGGCCTTCTCAGTCCGAGTTTGGCACATGTTCATGGTCTCAAGCAAGGGAACACTACAGAAATTTATGGCTCTCCAACTCCACCAGTAAATAATAATCACGAGCAGCTAGTCAATGGAGTTAGAGATGAATATTGTCTCAATCCCTATCAGTCGCAAAAGCTGGCCCAAATGCAAATTGATTTTTCTGGAGCAACATCGAGGCCTTCTGTGATTCACCGTGTAGGTGTGGATTCGGAGCATTCAGATGTAGAGCCACAATGCAAGGAAGAGGGGCCTGGCACCGATGAAAGACGACCTCGCAAACGAGGCAGAAAGCCTGCAAATGGCAGGGAGGAACCACTGAATCACGTTGAGGCAGAGAGGCAGCGCCGTGAAAAGTTGAACCAACGGTTCTATGCTTTACGAGCGGTTGTGCCCAATATCTCGAAAATGGACAAAGCTTCATTGCTGGGAGATGCCATTGCTTACATTAACGAGCTTCAAACAAAAGTGAAGGCCATGGAAGTTGAACGTGAGAAATCCGGGGTCACCTCAAGCGAAGCAACCGTGAACCCAGAAATTGAAAAGAAAGACCAATTCCTTGATGTCGATATCGACATCGAAGCTGGTCATGACGAAGTGGTCGTGAAGGTTGGCTGCCCATTAGAGTCACATCCTGCATCAAGAGTAATCAAGGCCATGAAAGAGGCTCAGATCAACGTTGTTGATTCAAAACTGTGTGAAGCAAATGATAGGGTGGTGCACACATTTGTGATAAAGTCTCCGGGATCGGAGCAGTTGACGAAGGAACAGTTGATAGCTGCATTTTCCCGGGACTCGACTCCGTTACACCCTCCGCTATCAACAGTTGGGTAA 1839 47.63 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNEANLQNKLSDLVERPNASNFSWNYAIFWQLSHSNSGDWVLGWGDGLCRDPREGEETEATQILSLRLEDESQQRMKKTALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPSGEGGPGKCLASRKHIWLLDILNSPSEYCVRSYLAKSAGIRTVVLVPTDVGVVELGSVRSVSESLELVQLVRSLFSSQPSLDRVRSSATMSMMAERKDENTPFASLGIAERGGGNPKVFGQTLNSWNLGRSHFREKLAIRKMDDRSWEACANGGRIQFQSPRNGLLSPSLAHVHGLKQGNTTEIYGSPTPPVNNNHEQLVNGVRDEYCLNPYQSQKLAQMQIDFSGATSRPSVIHRVGVDSEHSDVEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQTKVKAMEVEREKSGVTSSEATVNPEIEKKDQFLDVDIDIEAGHDEVVVKVGCPLESHPASRVIKAMKEAQINVVDSKLCEANDRVVHTFVIKSPGSEQLTKEQLIAAFSRDSTPLHPPLSTVG 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13481416 13483254 - Cp4.1LG03g16150.1 Cpe03g01792 467509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01792 612 Pfam Helix-loop-helix DNA-binding domain 443 489 IPR011598 GO:0046983
Cpe03g01792 612 MobiDBLite consensus disorder prediction 402 450 - -
Cpe03g01792 612 Gene3D - 432 502 IPR036638 GO:0046983
Cpe03g01792 612 PANTHER MYC 13 605 IPR045084 GO:0003700|GO:0006355
Cpe03g01792 612 SMART finulus 445 494 IPR011598 GO:0046983
Cpe03g01792 612 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 439 488 IPR011598 GO:0046983
Cpe03g01792 612 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 442 501 IPR036638 GO:0046983
Cpe03g01792 612 PANTHER TRANSCRIPTION FACTOR MTB1 13 605 - -
Cpe03g01792 612 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Cpe03g01792 612 CDD bHLH_AtAIB_like 436 509 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01792 Cpe08g00597 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01792 Cpe-Chr3:13481416 Cpe15g00064 Cpe-Chr15:445225 1.82E-97 dispersed
Cpe03g01792 Cpe-Chr3:13481416 Cpe08g00597 Cpe-Chr8:3928485 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49292 PF14215 bHLH-MYC_N 2.70E-53 CL0161 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01792 - - csv:101208845 1053.12