Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe03g01835 | ATGGATAAAGTCGAGTTGAGCGGTGTGTACGACGAAGCCATGGATTTGGACTTGGACTTGGACTTGGACTTGGACCTGGACTTGGTCTTGGATGAAGATGATCGGACAAAGAGGAAGAAAATCAAGAATCAGACAGTGGACATGGAGATGAAACATATTCACCACGCCGACGAAGATGGATCACACAAGCTTTTCCCGAAACAGGCGCTTAGTGTTCTGCTTGTTGAAGCTGATGATTCTACTCGCCGGATCATCGCCGCGCTTCTTCGTAAATGCAGTTACAGAGTCTATGCTGTTCCTGATGGACTGAAGGCATGGGAATGTTTGAAGGGAAGACCGCATAATGTTGATCTCATACTTACTGAAGTGGATTTGCCATCAATATCTGGTTATGCACTACTAACGTTAGTCATGGAGCACGACATTTGCAAAAATATTCCTGTTATAATGATGTCATCTTGCGACGCAGTTAGCATGGTCTTGAAGTGTATGTTAAAAGGTGCGGCTGATTTTCTTATTAAGCCAATTAGAAAAAATGAGCTCAAGAACCTTTGGCAGCATGTTTGGAGAAGGCACACGAAGATTAGTGGGAAATTCCCCTCCTATTTAACTGTTGGACAGCGTGAAGTTGTGGCCACTTCTGATAATGATGAAGGTAGCAATTATTCAAGTTACTGTGTGGCTTCTAGAAAGAAAATTAAGGAATGCAGTGAGAAGGGAAGTGATGCCCAGAGCTCTTGTACAACACCTTACTTGGAAGCTGAGAATAGATGCATGCCAAATATGCAGGGACTGTCACCACTGAAGGATGGGACTGCTCCAAAGCTAAATATGAGTTGTAAGAAACGTGGATTTGGTGCTTATATGGACAAAGAATTTGATATACTTAAAACCAACATCAGAGATAAGTCGGATAATGCGGCCAAAAGCGAAGCTTGCAATTCAGTTCCTTCAAGAATGAAAGAAGATTGTGTTATCGCAGAAATAAGAAGCCAGAATAAAGTTTTGAGGCCTGACTTTTACAAGGTCGTCGATGATGGTGCTTCTGAGATGTTTAGTTACAACAATAAGGACACTGAACCTTCCAGTAGAATCAACGACTTGATAGGAAATTTTGACAATAATCTGAAGCACATCAATAGCATCTGCAAGTTTGATGAACATCAAAAGTGCTGGTTATCTAGCTCCAACGATGCCAGCGCAATCAAATTAGAATTTTCTCCTCAGTTGGAGCTTTCTTTAAGAAGAATTTCCCCGGCCAAACCAGAAGGCCAGTGGAGCGAAAATGGGCATGTGCTGAACCACTCCAATGCTTCAGCCTTTTCATCGTACAATAGCTGTAAGATGATGAAACCCCCTTCTGTGACACAACCCAATGCCCCTACTGAATCAGACACAAGTGCTGGTCAATCTCCTAGACCATTGCCAAGTCTACTGTCAGGAATTTCGGGTTGTACATACCAAGACCATGGGGTTCCAGTAAGAAACAGTCGGAAGAATATGACCCCAAAGGTTGCTGGCGGGTTTGACCAGGCTGAACATCAAATTCTGCAACCACAACTTGATCTTTTTCCAGCTCCAGATTTGGTATCTGATAAGGCGTCCGCTGGTTGTGCTCTCCATTCCATGTTCTACACGCCATCAGTCTTGCCTCGAGTACCTAATACCAGATCAACATGTGAACAAGAGGTGTCTCCCATTTCTATTGATACCTCATCCGATAACTGTCGTGATATTTCCAACCCGAGAAAAGTTGGTCATCAATATGCAGAAAACACAGATAATACTATTGAACGAGTGGCAGAGGAGTTGAAACATGACTCTCCTAGTGCTGCTACACATAGTGCCAGTAGTAGCTTATGCAATGAAACGGATCATATTAATAGCAACACGAATGGGAGCGTTTGCAACCAAACAGAAGGCAACACCTCGTCAAGTGTAGTGGATGACAAGACTGCAGCCTCTGAAAATATGAATGCATCCAATGTCTTTACCTATGAAGGAAGTAAAGGACTGGATTCTTCTCGTTCCAGGCATAGGGAAGCCGCTCTGGAGAAGTTCAGGTTGAAACGGAAAGGTCGTTGTTATGAGAAAAAGGTCAGATATCAAAGCCGGAAAAGATTGGCAGAGCAGCGACCGCGAGTTAAAGGACAATTTGTTCGTCAACGGCCTAGTGACCCACCAGCCTCGGACTCTGGATGTCGATGA | 2208 | 43.66 | MDKVELSGVYDEAMDLDLDLDLDLDLDLVLDEDDRTKRKKIKNQTVDMEMKHIHHADEDGSHKLFPKQALSVLLVEADDSTRRIIAALLRKCSYRVYAVPDGLKAWECLKGRPHNVDLILTEVDLPSISGYALLTLVMEHDICKNIPVIMMSSCDAVSMVLKCMLKGAADFLIKPIRKNELKNLWQHVWRRHTKISGKFPSYLTVGQREVVATSDNDEGSNYSSYCVASRKKIKECSEKGSDAQSSCTTPYLEAENRCMPNMQGLSPLKDGTAPKLNMSCKKRGFGAYMDKEFDILKTNIRDKSDNAAKSEACNSVPSRMKEDCVIAEIRSQNKVLRPDFYKVVDDGASEMFSYNNKDTEPSSRINDLIGNFDNNLKHINSICKFDEHQKCWLSSSNDASAIKLEFSPQLELSLRRISPAKPEGQWSENGHVLNHSNASAFSSYNSCKMMKPPSVTQPNAPTESDTSAGQSPRPLPSLLSGISGCTYQDHGVPVRNSRKNMTPKVAGGFDQAEHQILQPQLDLFPAPDLVSDKASAGCALHSMFYTPSVLPRVPNTRSTCEQEVSPISIDTSSDNCRDISNPRKVGHQYAENTDNTIERVAEELKHDSPSAATHSASSSLCNETDHINSNTNGSVCNQTEGNTSSSVVDDKTAASENMNASNVFTYEGSKGLDSSRSRHREAALEKFRLKRKGRCYEKKVRYQSRKRLAEQRPRVKGQFVRQRPSDPPASDSGCR | 735 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 13677288 | 13682593 | - | Cp4.1LG03g15690.1 | Cpe03g01835 | 467552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe03g01835 | 735 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 | 38 | 713 | - | - | |
Cpe03g01835 | 735 | ProSiteProfiles | Response regulatory domain profile. | 71 | 189 | IPR001789 | GO:0000160 | |
Cpe03g01835 | 735 | SUPERFAMILY | CheY-like | 70 | 195 | IPR011006 | - | |
Cpe03g01835 | 735 | MobiDBLite | consensus disorder prediction | 703 | 719 | - | - | |
Cpe03g01835 | 735 | CDD | psREC_PRR | 72 | 175 | - | - | |
Cpe03g01835 | 735 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 38 | 713 | IPR045279 | GO:0009736 | |
Cpe03g01835 | 735 | MobiDBLite | consensus disorder prediction | 605 | 626 | - | - | |
Cpe03g01835 | 735 | SMART | REC_2 | 70 | 185 | IPR001789 | GO:0000160 | |
Cpe03g01835 | 735 | ProSiteProfiles | CCT domain profile. | 680 | 722 | IPR010402 | GO:0005515 | |
Cpe03g01835 | 735 | MobiDBLite | consensus disorder prediction | 703 | 735 | - | - | |
Cpe03g01835 | 735 | Pfam | CCT motif | 680 | 722 | IPR010402 | GO:0005515 | |
Cpe03g01835 | 735 | Gene3D | - | 71 | 229 | - | - | |
Cpe03g01835 | 735 | MobiDBLite | consensus disorder prediction | 610 | 626 | - | - | |
Cpe03g01835 | 735 | Pfam | Response regulator receiver domain | 72 | 183 | IPR001789 | GO:0000160 | |
Cpe03g01835 | 735 | MobiDBLite | consensus disorder prediction | 450 | 475 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01835 | Cpe-Chr3:13677288 | Cpe20g00010 | Cpe-Chr20:65704 | 9.88E-14 | dispersed | |
Cpe19g00394 | Cpe-Chr19:3519895 | Cpe03g01835 | Cpe-Chr3:13677288 | 3.98E-17 | transposed | |
Cpe13g00339 | Cpe-Chr13:3053370 | Cpe03g01835 | Cpe-Chr3:13677288 | 2.11E-90 | wgd | |
Cpe03g01835 | Cpe-Chr3:13677288 | Cpe05g00576 | Cpe-Chr5:3487535 | 1.18E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49297 | PF00072 | Response_reg | 7.90E-19 | CL0304 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe03g01835 | K12130 | - | qsu:112004762 | 543.117 |