Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01843 ATGGAAACTGGATCACAAATATCAGGCCTTCCCAGTTATCAACTTCAACTCTCCTTCCACCTCTCAAATGCACCTCCTCTTCCCCAACCCATCCACCAAATGGGATTCGTTCACTTCCAAGACCACACCCAGGTTTTGAGCTTCTTGTCACCCAATACCGCCGCCACCGCCACCATGCCACCTGCCTTTACAACTTCTGCTCACGCCCATCTCGTTAGTAGACCTTCTTGGAGCAACGAGCAGGTGGTGGGAACACAGGATCCGAAGCCCGGCAACGACGAGAACTGCAATGGTAGCGCTAGCGATGGCAACAATTCATGGTGGAGAAACACAAATGCAGATAAGAGTAAAGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTGCTCGACGATGGTTATAAATGGAGAAAATATGGCCAGAAAGTCGTCAAGAACAGCCTTCATCCTAGAAGCTACTACCGTTGTACGCATAATAACTGCCGAGTGAAGAAGAGGGTGGAGCGACTGTCGGAAGATTGCCGGATGGTGATAACCACGTACGAAGGTAGACACAACCACTCCCCTTGCGACGACTCCAATTCTTCGGAGCACGAGCCCTTTACATCCTTTTGA 645 50.23 METGSQISGLPSYQLQLSFHLSNAPPLPQPIHQMGFVHFQDHTQVLSFLSPNTAATATMPPAFTTSAHAHLVSRPSWSNEQVVGTQDPKPGNDENCNGSASDGNNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13752289 13754229 + Cp4.1LG03g15600.1 Cpe03g01843 467560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01843 214 Pfam WRKY DNA -binding domain 141 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe03g01843 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 210 IPR044810 GO:0003700
Cpe03g01843 214 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe03g01843 214 SUPERFAMILY WRKY DNA-binding domain 132 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe03g01843 214 MobiDBLite consensus disorder prediction 74 113 - -
Cpe03g01843 214 ProSiteProfiles WRKY domain profile. 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe03g01843 214 MobiDBLite consensus disorder prediction 195 214 - -
Cpe03g01843 214 Gene3D WRKY domain 126 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe03g01843 214 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 27 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01843 Cpe-Chr3:13752289 Cpe08g00656 Cpe-Chr8:4472570 2.82E-71 dispersed
Cpe03g01843 Cpe-Chr3:13752289 Cpe10g00373 Cpe-Chr10:2206612 5.92E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49301 PF03106 WRKY 1.40E-24 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01843 - - cmax:111472906 359.377