Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00104 ATGGAGTCTTTGAATTCTTCCTCCTTCTTCTTCTTCTTCCTCGTTTCTCTTCTGTTCTTCCTCGCTTTCCTATGGAGATTACGCCGTAAACTCCCTTATCCGCCCGGCCCTACCGGCCTCCCTATCATCGGCAATATGCTCATGATGAACGAACTAACTCACCGTGGCCTCACTCGTCTCGCCGCCGTCTACGGCGGTCTTTTCCACCTCCGTCTCGGCGTTCTCCACATGGTGGTGGTTTCCACGCCAGAAATGGCACGCGAGTTCCTCCAAGTTCAGGATATCGCATTCGCAAATAGACCTGCAAACGTCGCGATATCGTACCTCACGTACGACCGCGCGGATATGGCCTTCGCAAATTACGGTCCATTCTGGCGCCAAATGCGCAAGATCTGTGTCATGAAGCTTTTCAGTCGACGGCGGGCTGAATCATGGGCGTCAGTGCGCGATGAAGTCGATTCTGTACTTCAAATCGTATCGAATAAAATCGGAGAGGCTGTGAATATAGGCGAACTCGTTTTCGGTCTGACACGAAACATAACCTACAAGGCCGCGTTTGGATCGTGCTCGCACGAAGGACAAGACGAATTCGTGGAAATCCTGCAAGAATTTTCTAAACTGTTTGGGGCTTTTAACATTGCAGATTTTTTGCCATGGTTAGGCTGGATTCATGCTGGAGAATTCAATCGAAGAATGGAAAAAGCTAGAAAAGCTCTTGATGTGTTCATTGATAGCATAATCGATGAACATATAGCAAAAAAATTGGGGAAAAACAATGATAATGATGAACAGGACGTTGAATCCGATATGGTGGATGAATTAATGGCGTTCCTCGTCGATGAATCGAGTAGCAATGATTTTCAACTTACTAGAGATAATATCAAAGCGATAATCATGGATGTGATGTTCGGCGGAACAGAGACGGTTGCTTCTGTGATTGAATGGTCCATGGCGGAATTAATGAGAAATCCGGAAGAGTTACAAAAGCTTCAAGAAGAACTCACACGGACTGTTGGATTAGATCGAAGACTCCATGAATCGGACCTTCAAAATCTGCCCTACCTGAAAGCCGTCGTGAAGGAGACGCTCCGCCTTCATCCGCCGATTCCGTTGCTCCTCCACGAGACCGCCGTGGACACCGCCGTTGCAGGCTACTTCATTCCGACTGGTTCAAGAGTGTGGATCAACTGCTGGGCTATTGGCCGGGATGGAACCGCTTGGGAAGATCCGGACCGGTTTCGACCAGGGAGATTTGAAAACGACGCCGCTCCGGATTTCAAAGGGAATGATTTTGAGTTCCTTCCGTTCGGGTCGGGTCGGCGGTCTTGCCCCGGAATGCAACTCGGACTTTATGCTTGTGAGATGGCGGTGGCTAATCTTCTTCATTCCTTCTCGTGGGAGTTGCCGGACGGCATGAAGGCGGAGGAGCTGGACATGAACGACTCGTTCGGTCTAACCGCTCCCAGAGCGGTTCGACTCGTTGCTGTGCCGAGTTACCGGCTTAACTCGGCCGGGTTCAATTAA 1524 49.74 MESLNSSSFFFFFLVSLLFFLAFLWRLRRKLPYPPGPTGLPIIGNMLMMNELTHRGLTRLAAVYGGLFHLRLGVLHMVVVSTPEMAREFLQVQDIAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRRRAESWASVRDEVDSVLQIVSNKIGEAVNIGELVFGLTRNITYKAAFGSCSHEGQDEFVEILQEFSKLFGAFNIADFLPWLGWIHAGEFNRRMEKARKALDVFIDSIIDEHIAKKLGKNNDNDEQDVESDMVDELMAFLVDESSSNDFQLTRDNIKAIIMDVMFGGTETVASVIEWSMAELMRNPEELQKLQEELTRTVGLDRRLHESDLQNLPYLKAVVKETLRLHPPIPLLLHETAVDTAVAGYFIPTGSRVWINCWAIGRDGTAWEDPDRFRPGRFENDAAPDFKGNDFEFLPFGSGRRSCPGMQLGLYACEMAVANLLHSFSWELPDGMKAEELDMNDSFGLTAPRAVRLVAVPSYRLNSAGFN 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 938648 940322 + Cp4.1LG04g01050.1 Cpe04g00104 467666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00104 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Cpe04g00104 507 Pfam Cytochrome P450 34 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 7 503 - -
Cpe04g00104 507 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00104 507 PANTHER CYTOCHROME P450 84A1-RELATED 7 503 - -
Cpe04g00104 507 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00228 Cpe-Chr3:1138490 Cpe04g00104 Cpe-Chr4:938648 1.93E-90 dispersed
Cpe03g00440 Cpe-Chr3:2502016 Cpe04g00104 Cpe-Chr4:938648 3.89E-99 dispersed
Cpe03g00880 Cpe-Chr3:5551921 Cpe04g00104 Cpe-Chr4:938648 1.90E-26 dispersed
Cpe04g00104 Cpe-Chr4:938648 Cpe19g00843 Cpe-Chr19:6246842 5.01E-136 dispersed
Cpe06g00242 Cpe-Chr6:1293835 Cpe04g00104 Cpe-Chr4:938648 3.66E-37 dispersed
Cpe16g00690 Cpe-Chr16:7138988 Cpe04g00104 Cpe-Chr4:938648 5.59E-73 dispersed
Cpe04g00104 Cpe-Chr4:938648 Cpe03g01791 Cpe-Chr3:13468487 6.15E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00104 K09755 - csv:101217850 818.92