Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00112 ATGGGCGATACTCGAGGTGGCTGCTGTCCATCCATGGATCTGTTCCGCTCCGAGCCGATGCAGCTGGTGCAGCTCATCATTCCCATCGAGGCTGCGCATCGCACCATTTCCTACCTTGGTGATCTCGGTCTTCTCCAGTTCAAAGATCTCAATGTTGAGAAAAGCCCGTTCCAGCGTACTTATGCTGCACAGATCAAAAGATGTGGAGAGATGGCACGCAAATTGCATTTTTTCAAGGAACAGATGTTGAAGGCTGGATTGTCAAGCAAAAGTTCTGTGTCACAAGTTGATATCAGTATAGATGACCTTGAGGTTAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCTAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTACAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCAGTTCAGCGCAAAGCAGTGCCGTAGAGCAGCAAAGAGAATTTGAATCTAGGCGAGTTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCATCTGCGGATCAGTCGAAGCCAGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAGTCTATGGCATTTGAGAGGATACTATTTCGTGCAACCAGGGGCAATGTGTTTCTGAAGCAGGCTGCAGTTGACGATCCTGTTCCAGATCCCATTTCTGGAGAGAAGGTTGAGAAAAACGTGTTTGTTGTTTTTTACTCTGGAGAAAGAGCGAAGAATAAGATTCTAAAAATATGTGAGGCATTTGGTGCAAACCGTTACCCTTTTACCGAGGACTTGGGGAAACAAGCCCAAATGATCGCTGAGGTTTCTGGAAAACTGGCTGAGCTGAAGACTACAATAGATGTAGGGCTGCTGCACCGGGGTAATCTGTTGAAGAATATTGGAGAACATTTTGAAAATTGGAATATCATGGCGAGGAAGGAAAAGTCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACCAAAAAATGTCTGGTCGCCGAGGGATGGGGTCCTGTTTTTGCCACAAAACAGATTCAAGATGCACTCCAGCGAGCAGCAACTGACTCCAACTCCCAAGTTGGACCAATTTTCCAGGTTTTATTAACTACAGAAGCACCACCTACTTATTTTCGGACAAACAAATTCTCCACTGCCTTTCAAGAAATTGTCGATGCCTATGGGGTAGCAAAGTATCAAGAAGCCAATCCTGGTGTATACACCATTGTCACGTTTCCATTTCTGTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTCTGTTACTTGCAACACTCTATTTTATATTACGGGAAAAAAAACTTTCTTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTGATGATGTCACTATTTTCGATATACACGGGTCTGATCTATAATGAGTTCTTCTCAGTCCCATTTGGACTATTTGGTCGCTCAGCATATGAATGCCGTAGTCCTGATTGCAGCGATTCTACCACTGTGGGGTTGATAAAGGCGGGTTCTACATATCCATTTGGCTTGGATCCTGTATGGCATGGCACTCGAAGTGAGCTTCCATTTCTCAACTCTCTGAAAATGAAAATGTCAATTCTCCTTGGAGTTGCACAAATGAATCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTCCGGAACAGCATCAATATCTGGTTCCAATTTCTGCCACAGATGATATTTCTGAACAGCCTTTTCGGTTATCTTTCTCTTCTGATCATCATAAAGTGGTGCACTGGTTCAAAAGCTGATCTGTACCACGTAATGATATATATGTTTTTGGGCCCAACTGAAGATCTGGCTGAAAATCAGCTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTCCTCTTACTCGCCCTTATTGCCGTGCCATGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAAACAGCACGAACAGAGGTTCCAAGGCCAGTCTTATGCGCCACTTCCAAGTGCTGATGATTCCCTTGAGTTGGACTCGCATCATGATTCACATGGTCACGAGGAGTTCGAGTTCAGTGAGGTTTTTGTGCATCAGCTTATACATACCATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCCTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCACACTCGGAGTTGTCAAGTGTGTTCTATGACAAGGTTCTCGTTCTATCTGCAGGGTTCAACAACGTTATAATCTTAATAGTAGGCATTATCGTTTTTATTTTTGCTACCGTGGGTGTGTTGCTATTAATGGAGACTCTAAGTGCCTTCCTTCATGCACTGCGTCTTCATTGGGTCGAGTTTCAAAACAAGTTCTACGAGGGAGACGGTTACAAATTCAATCCTTTCTCATTTGCATTGCTTGACGAAGATGATGAATAA 2457 43.14 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIEAAHRTISYLGDLGLLQFKDLNVEKSPFQRTYAAQIKRCGEMARKLHFFKEQMLKAGLSSKSSVSQVDISIDDLEVKLGELEAELVEINANSEKLQRSYNELVEYKLVLQKAGEFFSSAQSSAVEQQREFESRRVGGDSIEVPLLLEQESSADQSKPVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQAAVDDPVPDPISGEKVEKNVFVVFYSGERAKNKILKICEAFGANRYPFTEDLGKQAQMIAEVSGKLAELKTTIDVGLLHRGNLLKNIGEHFENWNIMARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAATDSNSQVGPIFQVLLTTEAPPTYFRTNKFSTAFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGRSAYECRSPDCSDSTTVGLIKAGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIIIKWCTGSKADLYHVMIYMFLGPTEDLAENQLFPGQKNVQIVLLLLALIAVPWMLLPKPFLLKKQHEQRFQGQSYAPLPSADDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNVIILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFNPFSFALLDEDDE 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 997971 1014106 + Cp4.1LG04g01070.1 Cpe04g00112 467674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00112 818 PANTHER VACUOLAR PROTON ATPASES 4 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe04g00112 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 818 - -
Cpe04g00112 818 PIRSF ATP6V0A1 10 818 IPR026028 GO:0000220|GO:0046961
Cpe04g00112 818 Pfam V-type ATPase 116kDa subunit family 38 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe04g00112 818 Coils Coil 93 127 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00112 Cpe15g00555 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00112 Cpe-Chr4:997971 Cpe16g00562 Cpe-Chr16:6414568 0 dispersed
Cpe11g00231 Cpe-Chr11:1241860 Cpe04g00112 Cpe-Chr4:997971 1.19E-26 wgd
Cpe15g00555 Cpe-Chr15:6387031 Cpe04g00112 Cpe-Chr4:997971 0 wgd
Cpe04g00112 Cpe-Chr4:997971 Cpe07g00387 Cpe-Chr7:2501426 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00112 K02154 - csv:101211364 1500.34