Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00158 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTAATTGCTAATTCACTGTTGAGTGCAGCAGAGAGCTTCAATGTAGAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATAGACCTTTAATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAATCAAAGCCCATCAGATCTGTCGCCTTCGCCGTCTCCATCACCGGCCGAGGCAGCTCGTCCAGTGCACACTCATAAACATTCCCGCCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGTCTACAAATCTAAAAGACATGAAGATGCAAGAAAAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTACAGGAATCACCATTTTGATATGCACTATTGTTGCCTTCTGGGTCTGCAAGAGGTTTAAAATTCGAACAGAGGAACCCGCCGAGAAGCTTTCTATAACGAGTGAAACAGGAGAGAAGACAGCCAAACAAAAATCTGGGTTTGATCTTTTCGATCTCAGTACGCATGGAATGGATGTTGAAGAACACAGTGTTTCCTCATCTGGGGAGAGAGTTACTCCTGTTCAATGTTGTTCTTCTGATGAGGAGGAATCATTCCATTCTTGTGGGGATCCCAATTTGTCGAATGTTCGTCTTTCAAATGCTTCTGAATCTTCTTCAGCTAATGTGAAAACAAATTCTAATTCTTCAGAACCTAACAAACCATTAACTTCTGACCAGTTTCATCTTACCCCTTCTCCTTGTAACTCAGAAACCAAGGATGTCCCATCTTTAGCTCCGCCTCCACCACCGCCGCCGCCGCCGCCGCTGCGACCATCTCCGGTCACTTATCGCAGTTCATTTACCCTCTCTTCACCCTTTTCAACTGGATCCACCTCCTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGCCATCACCTCCAAACATTGCAAAACCTTCACTACCATCATCTACTATTCCTCCACCCCCTTGTCCACCGCCAAGTTTGAAAGAAAACGCTTATTCTTTCAAAGCCCCACCTCCTCCTCCTCCTTCCAAACTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATCTGCTGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTCGGCTACAACCAACATGGTTCAATGAAGAATGGTGATGCTAGCAACAAAACCCCTTCTCCAAGCAAGCATATACTAGAGGCTAAGAGACTCCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCCGCAGAACATGCCTGTGAAGCCATAGAACAAGGGACTGGGTTGCGTTTAAGACAACTTGAAGCACTGGTAAAGATGGTACCAACACAGGAAGAACAAGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATATGGGTGCACAGAGAAGTTTGTGATAGCAATTCTGAGAATACCATTCGCCTTCCAACGAGTGGAAGCCATGCTCTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCTTGCAAGGAGCTAAGATCCAGCAGGCTTTTCCTGAAACTACTTGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTGGGAACAAGCAGAGGAGGCGCAAAAGCATTCAAACTAGACGCACTCCTAAGACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTCCTCCATTTCGTGGTCCAAGAAATAATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGATCTGGTCTCCGGCCTGAGCACCGAATTACACAACGTTAAGCGAGCGGCAACGACCGATCTGAAAGTTCTGGCGAGCGCCACAGCGAATCTGAACGAGGGAATGGCGAAATTGCAAGAACTGGTGTTGAAGGGACTGTGTGGAGATGAACGGAGTGGGAACTTCGTGAGCGCAATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGTTGGTGAGGAAGGACGAGGAAGGGGTGATGGGAAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTCTGGGAATGTTGGACAATGTGTGTAAAAGCTTCAAGATCGGAAGTTGA 2352 45.75 MGCVVKCVFMIVIANSLLSAAESFNVEELERVSGEDESGGNRPLILERFRALLGLNQSPSDLSPSPSPSPAEAARPVHTHKHSRPHQLRLHKSRPVYKSKRHEDARKRVRKILVAVLVSTGITILICTIVAFWVCKRFKIRTEEPAEKLSITSETGEKTAKQKSGFDLFDLSTHGMDVEEHSVSSSGERVTPVQCCSSDEEESFHSCGDPNLSNVRLSNASESSSANVKTNSNSSEPNKPLTSDQFHLTPSPCNSETKDVPSLAPPPPPPPPPPLRPSPVTYRSSFTLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNIAKPSLPSSTIPPPPCPPPSLKENAYSFKAPPPPPPSKLPQFMAFGKEGNLLPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHGSMKNGDASNKTPSPSKHILEAKRLQNLTILLKALNLSAEHACEAIEQGTGLRLRQLEALVKMVPTQEEQAKLLSYEGDIGEYGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGAKAFKLDALLRLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATTDLKVLASATANLNEGMAKLQELVLKGLCGDERSGNFVSAMKGFLSYVKKTMELVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1521779 1526031 - Cp4.1LG04g00490.1 Cpe04g00158 467720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00158 783 PANTHER FORMIN-RELATED 264 780 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe04g00158 783 MobiDBLite consensus disorder prediction 326 350 - -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 58 102 - -
Cpe04g00158 783 SUPERFAMILY Formin homology 2 domain (FH2 domain) 387 777 - -
Cpe04g00158 783 Pfam Formin Homology 2 Domain 382 772 IPR015425 -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 261 279 - -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 280 324 - -
Cpe04g00158 783 ProSiteProfiles Formin homology-2 (FH2) domain profile. 374 783 IPR015425 -
Cpe04g00158 783 Gene3D Formin, FH2 domain 379 780 IPR042201 -
Cpe04g00158 783 SMART it6_source 374 781 IPR015425 -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 215 258 - -
Cpe04g00158 783 Coils Coil 535 555 - -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 79 96 - -
Cpe04g00158 783 PANTHER FORMIN-LIKE PROTEIN 264 780 - -
Cpe04g00158 783 MobiDBLite consensus disorder prediction 215 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00158 Cpe-Chr4:1521779 Cpe05g01150 Cpe-Chr5:7799988 1.22E-123 dispersed
Cpe18g00055 Cpe-Chr18:1095180 Cpe04g00158 Cpe-Chr4:1521779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00158 - - cmos:111441137 1404.42