Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00182 ATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGGCCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCAAGCTCGCCCTTGAATGAGAAGAGCAGTGCTTCAAGATCAACCCACATCAGAGCTATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGGCCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCAAGCTCGCCCTTGAATGAGAAGAGCAGTGCTTCAAGATCAACCCACATCAGGTACACCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCCTGATATGGTAA 984 51.42 MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSASRSTHIRAMEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSASRSTHIRYTPFVLTAVFAAARALIW 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1846310 1849200 + Cp4.1LG04g00310.1 Cpe04g00182 467744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00182 327 PANTHER LAMIN-LIKE PROTEIN 13 150 - -
Cpe04g00182 327 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Cpe04g00182 327 PANTHER LAMIN-LIKE PROTEIN 168 322 - -
Cpe04g00182 327 ProSiteProfiles Phytocyanin domain profile. 186 286 IPR003245 GO:0009055
Cpe04g00182 327 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Cpe04g00182 327 Gene3D - 184 287 IPR008972 -
Cpe04g00182 327 Gene3D - 29 132 IPR008972 -
Cpe04g00182 327 SUPERFAMILY Cupredoxins 185 284 IPR008972 -
Cpe04g00182 327 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Cpe04g00182 327 Pfam Plastocyanin-like domain 196 278 IPR003245 GO:0009055
Cpe04g00182 327 PANTHER BLUE COPPER PROTEIN 13 150 IPR039391 GO:0009055
Cpe04g00182 327 PANTHER BLUE COPPER PROTEIN 168 322 IPR039391 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00492 Cpe-Chr3:2893739 Cpe04g00182 Cpe-Chr4:1846310 1.48E-70 dispersed
Cpe04g00182 Cpe-Chr4:1846310 Cpe18g00130 Cpe-Chr18:2867570 3.90E-31 dispersed
Cpe04g00182 Cpe-Chr4:1846310 Cpe04g00183 Cpe-Chr4:1852202 3.70E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00182 - - csv:101210415 252.292