Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00182 | ATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGGCCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCAAGCTCGCCCTTGAATGAGAAGAGCAGTGCTTCAAGATCAACCCACATCAGAGCTATGGAGGTTCTAAGAAGGGGCAGCGGCGGTGGGCTGTTGGCGGCGGTGGTGCTGCTGCTGCTGGCGGCGGCGGTGTCGGAAGTTTCAGCTAAACGGTGGACTGTTGGTGACAACATGGGGTGGACGTCCAATGTGAACTACACTGTCTGGGCTGAAGGGAAGCACTTCTACTATGACGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGGATGTGTTGGAGGTGAACAAGACAAACTACGAGGCTTGCAATTCTGAGAATCCACTAAAAAACTTCACCACAGGAGCTGGAAGAGATGTTGTTCATTTGAATGTAACCAGGCCTTATTACTTCATAAGTGGCAAAGGGTTTTGCTATGGAGGCATGAAGCTCGCTATCAATGTCGAGCACCTACCGCCCCCGCCCTCAAGCTCGCCCTTGAATGAGAAGAGCAGTGCTTCAAGATCAACCCACATCAGGTACACCCCGTTCGTTTTAACCGCTGTTTTTGCAGCTGCTCGGGCCCTGATATGGTAA | 984 | 51.42 | MEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSASRSTHIRAMEVLRRGSGGGLLAAVVLLLLAAAVSEVSAKRWTVGDNMGWTSNVNYTVWAEGKHFYYDDWLFFVYDRNQMDVLEVNKTNYEACNSENPLKNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAINVEHLPPPPSSSPLNEKSSASRSTHIRYTPFVLTAVFAAARALIW | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1846310 | 1849200 | + | Cp4.1LG04g00310.1 | Cpe04g00182 | 467744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00182 | 327 | PANTHER | LAMIN-LIKE PROTEIN | 13 | 150 | - | - | |
Cpe04g00182 | 327 | ProSiteProfiles | Phytocyanin domain profile. | 31 | 131 | IPR003245 | GO:0009055 | |
Cpe04g00182 | 327 | PANTHER | LAMIN-LIKE PROTEIN | 168 | 322 | - | - | |
Cpe04g00182 | 327 | ProSiteProfiles | Phytocyanin domain profile. | 186 | 286 | IPR003245 | GO:0009055 | |
Cpe04g00182 | 327 | SUPERFAMILY | Cupredoxins | 30 | 129 | IPR008972 | - | |
Cpe04g00182 | 327 | Gene3D | - | 184 | 287 | IPR008972 | - | |
Cpe04g00182 | 327 | Gene3D | - | 29 | 132 | IPR008972 | - | |
Cpe04g00182 | 327 | SUPERFAMILY | Cupredoxins | 185 | 284 | IPR008972 | - | |
Cpe04g00182 | 327 | Pfam | Plastocyanin-like domain | 41 | 123 | IPR003245 | GO:0009055 | |
Cpe04g00182 | 327 | Pfam | Plastocyanin-like domain | 196 | 278 | IPR003245 | GO:0009055 | |
Cpe04g00182 | 327 | PANTHER | BLUE COPPER PROTEIN | 13 | 150 | IPR039391 | GO:0009055 | |
Cpe04g00182 | 327 | PANTHER | BLUE COPPER PROTEIN | 168 | 322 | IPR039391 | GO:0009055 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00492 | Cpe-Chr3:2893739 | Cpe04g00182 | Cpe-Chr4:1846310 | 1.48E-70 | dispersed | |
Cpe04g00182 | Cpe-Chr4:1846310 | Cpe18g00130 | Cpe-Chr18:2867570 | 3.90E-31 | dispersed | |
Cpe04g00182 | Cpe-Chr4:1846310 | Cpe04g00183 | Cpe-Chr4:1852202 | 3.70E-31 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00182 | - | - | csv:101210415 | 252.292 |