Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00225 ATGGTTACCGAAGAAGAAGCTCTAATCCAAAAGGTGGTGGATTTGTATGAGCAAATCTCTGGGCTTGAAAGCCTCAAACCTTGTAAACATGTCGACACTCTGTTCACAGAGTTGGTGGTCACGTGCATGCCACCCACCAGCCCTAATTTTCACATCAATTCACTCTCAAACCCTGTTCAACAAATGAGATCAAATTTGATCCGCCTTTGCGGTCAAGCTGAGTCCCTTTTGGAGTCCCATTTCTCTGATCTCTTAGCCAATTTTGATTACCCTCTTCACCATCTCCATCTCTTCCCTTACTTCTCCAATTATCTCAAGCTTAGCCTCCTTGAATTCTCCATCCTCCGCCGCCACTGCCCCGTCCTCCCCTCCTCGGTCGCCTTCGTCGGCTCCGGCCCTCTTCCTCTCACCTCCATCGTCCTCGCCACCCGCCACCTCCCCTCCACCTCCTTCCACAATTACGATCTCGACCCACTTGCTAATTCCCAGGCGTCGAAATTGGTATCGGTGGACGCGGACCTGAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGTTGAAGGAGTACGAGGTTGTGTTTTTGGCAGCTCTAGTAGGAATGGAGAAGGAGGAGAAATTGAGAGTGATAGAGCATTTGTGTGAGTTCATGGCGGAAGGGGCTTGTTTGATGGTGAGAAGTGCTCATGGAGGAAGGGCTTTCCTTTATCCTGTGGTGGAGGAATGTGATTTGGTAGGGTTTGAGGTTCTATCGGTGTTTCATCCGAGTGATGAAGTGATAAACTCAGTGATAATTGCAAGAAAAAAGAAGAAGGATCATGATGATGATGATGATTGCTTGAAGATTGTTGGTGATGATAATCATGAAAATGGTATTGAAAATGGTGTTGTTGTTCATAACAAACAATGTTGTGATCACATTCATGGCTTCAACAATCATGGAGGAATGATTGAGGAGTTAGCTGAGTAG 984 46.85 MVTEEEALIQKVVDLYEQISGLESLKPCKHVDTLFTELVVTCMPPTSPNFHINSLSNPVQQMRSNLIRLCGQAESLLESHFSDLLANFDYPLHHLHLFPYFSNYLKLSLLEFSILRRHCPVLPSSVAFVGSGPLPLTSIVLATRHLPSTSFHNYDLDPLANSQASKLVSVDADLKTRMVFHTCDIMKVTEELKEYEVVFLAALVGMEKEEKLRVIEHLCEFMAEGACLMVRSAHGGRAFLYPVVEECDLVGFEVLSVFHPSDEVINSVIIARKKKKDHDDDDDCLKIVGDDNHENGIENGVVVHNKQCCDHIHGFNNHGGMIEELAE 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2724894 2726261 + Cp4.1LG04g08620.1 Cpe04g00225 467787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00225 327 Pfam Nicotianamine synthase protein 5 276 IPR004298 GO:0030410|GO:0030418
Cpe04g00225 327 PANTHER NICOTIANAMINE SYNTHASE 3 3 312 IPR004298 GO:0030410|GO:0030418
Cpe04g00225 327 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Cpe04g00225 327 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00225 Cpe11g00876 CCT
Cpe04g00225 Cpe07g00861 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00225 Cpe-Chr4:2724894 Cpe07g00861 Cpe-Chr7:7787265 2.29E-109 dispersed
Cpe04g00225 Cpe-Chr4:2724894 Cpe11g00876 Cpe-Chr11:7106470 8.26E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00225 K05953 - csv:101218907 491.115