Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00279 ATGGAGATTCTCTCTTTCACTCTGTATTTAATAATATTCCTCATTTCTTCTGCTTTTTTGCTTTATTTGAAGAGAAATGAAACCCCAAAACCCAGAAAATCTCTTAGGCTTCCTCCTGGTTCCATGGGATTGCCATGGATTGGAGAAACTTTGCAGCTTTATTCTCAAGATCCCAACATATTTTTCTCCGAAAAACAGAGAAGATATGGAGAAATTTTTAAAACCAACATTTTGGGATGTCCTTGTGTTATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTTTGGTAACTAATGCTCATTTATTCCGGCCAACTTACCCCAAAAGCAAAGAGACAATGATCGGTCCGGCGGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAACATTCGGAAACTTGTTCAAAATTCCCTCTGTCTCGGAAGCCTCAGAAACCTTGTTCCTCATATTGAAACCGCCGCCATTTCCGCCGCCGAATCATGGGCTGCCGCCGGCCACGTCATCAACACCTTCCTTGAAATGAAAAAGTTTTCTTTCGATGTGGGAATTCTAGCAGTGTTTGGGAAGCTAGAAAGTGATTACAGTGAGAAACTCAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCAGATTACCAGGAACAGCATATTCCAAAGCATTATCAGCAAGAAAGAAACTGAGAGAGATTCTGGGAGAGATAATAATGGAGCGGAGAGAAAAAAGGGTAACAGAGAGAGATTTGGTGGGTCATCTCTTGAGCTTCAGAGATGAAAATGGTGGAATTTTAAGTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCGGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATCCTTAAATACCTCCATGATAATTTGAAGCTCTTTGAGGCTGTCCGGGCAGAGCAGATGGAGATTCATAGAAGAAATGATGATGGGAAGATGCCTCTGTCTTGGGCACAGATTAAGGATATGCCCTTAACTCATAGGGTTGTATTAGAAAGCTTGAGGATGGCTAGTATCATATCCTTCACTTTTAGGGAGGCAGTGGTGGATGTGGAATATAAAGGGTTCTTAATACCAAAGGGTTGGAAGGTGATGCCTTTGTTCAGGAATATTCATCACAGTCCTGACTACTTCCCAAACCCTCAAATCTTTGATCCCTCTAGATTTGAGGTGTCTCCAAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAATGAACTTGCCAAGCTCGAGATCCTCGTCTTACTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGCGGGGTTCAATATGGGCCATTCCCAGTGCCTGTCAACGGGCTACCGGCCAGATTTTTCAAACAAGGGACAACCCACCAATAG 1428 44.12 MEILSFTLYLIIFLISSAFLLYLKRNETPKPRKSLRLPPGSMGLPWIGETLQLYSQDPNIFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNIRKLVQNSLCLGSLRNLVPHIETAAISAAESWAAAGHVINTFLEMKKFSFDVGILAVFGKLESDYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDLVGHLLSFRDENGGILSEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFEAVRAEQMEIHRRNDDGKMPLSWAQIKDMPLTHRVVLESLRMASIISFTFREAVVDVEYKGFLIPKGWKVMPLFRNIHHSPDYFPNPQIFDPSRFEVSPRPNTFMPFGNGVHSCPGNELAKLEILVLLHHLITKFRWEVVGSQSGVQYGPFPVPVNGLPARFFKQGTTHQ 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3474111 3476373 - Cp4.1LG04g08030.1 Cpe04g00279 467841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00279 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cpe04g00279 475 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 469 - -
Cpe04g00279 475 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 PANTHER CYTOCHROME P450 26 11 469 - -
Cpe04g00279 475 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00279 475 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00279 Cpe15g00489 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01220 Cpe-Chr2:11038508 Cpe04g00279 Cpe-Chr4:3474111 5.76E-150 dispersed
Cpe04g00279 Cpe-Chr4:3474111 Cpe14g00428 Cpe-Chr14:2689691 0 dispersed
Cpe11g00152 Cpe-Chr11:855121 Cpe04g00279 Cpe-Chr4:3474111 0 wgd
Cpe15g00489 Cpe-Chr15:5867774 Cpe04g00279 Cpe-Chr4:3474111 0 wgd
Cpe02g00180 Cpe-Chr2:920166 Cpe04g00279 Cpe-Chr4:3474111 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00279 K09843 - csv:101219389 822.772