Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00317 ATGTTGCTAAGATCGTGCTATCGGCCGCTTGAGCGGTGTTTTGGGCGGTGGGCTGGCGATGGGCTGCTCTGGCACTCGGATTTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAACTCTTGTCTTGAAGATCAGAGTCAGGTTTTCACGTCCCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTCGTTAATAAGCATCTTGTTCCTTATATGCACAAGTTTGCTTTAGAACAAGGTGGGCTATCAGAGGATGTTATTAAGAAAGCATTCAATGCTACTGAAGAGGAGTTTTTGCGTTTGGTGAAGAGGGCTTTGCCTGCTAAGCCACAAATTGCATCTGTTGGATCATGTTGTCTTGTAGGTGCAATTTCTAATAAGAAGTTATACATTGCAAATCTTGGAGATTCGAGAGCTGTTCTTGGCCGTAGAGTTTCTGAGAATCAAAGAACACCCGTCGTTGCAGAACGATTGTCGACCGATCACAACGTCGGCGTCGATGAAATTAGGGAAGAGGTTGTTGCACTTCATCCCGACGACGCTCATATCGTTGTCTATACTCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTCCATTTTGTTCATGAATTCGTTCTTGTTCGACTCGAATCATTAGAATTCTCTCGTTATAGTTTTATTGAATGTGATTACTGGTAG 720 45.0 MLLRSCYRPLERCFGRWAGDGLLWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLVPYMHKFALEQGGLSEDVIKKAFNATEEEFLRLVKRALPAKPQIASVGSCCLVGAISNKKLYIANLGDSRAVLGRRVSENQRTPVVAERLSTDHNVGVDEIREEVVALHPDDAHIVVYTRGVWRIKGIIQVHFVHEFVLVRLESLEFSRYSFIECDYW 239
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 3923949 3925007 - Cp4.1LG04g07670.1 Cpe04g00317 467879
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00317 239 Gene3D - 26 214 IPR036457 -
Cpe04g00317 239 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 213 - -
Cpe04g00317 239 CDD PP2Cc 42 212 IPR001932 -
Cpe04g00317 239 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Cpe04g00317 239 PANTHER ALPHABET, ISOFORM E-RELATED 4 213 - -
Cpe04g00317 239 SUPERFAMILY PP2C-like 43 195 IPR036457 -
Cpe04g00317 239 Pfam Protein phosphatase 2C 56 177 IPR001932 -
Cpe04g00317 239 ProSiteProfiles PPM-type phosphatase domain profile. 35 239 IPR001932 -
Cpe04g00317 239 SMART PP2C_4 25 234 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00317 Cpe-Chr4:3923949 Cpe04g00604 Cpe-Chr4:6319570 1.44E-75 dispersed
Cpe15g00450 Cpe-Chr15:5604206 Cpe04g00317 Cpe-Chr4:3923949 1.62E-13 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00317 - K01102 csv:101216862 395.586