Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g00317 | ATGTTGCTAAGATCGTGCTATCGGCCGCTTGAGCGGTGTTTTGGGCGGTGGGCTGGCGATGGGCTGCTCTGGCACTCGGATTTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAACTCTTGTCTTGAAGATCAGAGTCAGGTTTTCACGTCCCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTCGTTAATAAGCATCTTGTTCCTTATATGCACAAGTTTGCTTTAGAACAAGGTGGGCTATCAGAGGATGTTATTAAGAAAGCATTCAATGCTACTGAAGAGGAGTTTTTGCGTTTGGTGAAGAGGGCTTTGCCTGCTAAGCCACAAATTGCATCTGTTGGATCATGTTGTCTTGTAGGTGCAATTTCTAATAAGAAGTTATACATTGCAAATCTTGGAGATTCGAGAGCTGTTCTTGGCCGTAGAGTTTCTGAGAATCAAAGAACACCCGTCGTTGCAGAACGATTGTCGACCGATCACAACGTCGGCGTCGATGAAATTAGGGAAGAGGTTGTTGCACTTCATCCCGACGACGCTCATATCGTTGTCTATACTCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTCCATTTTGTTCATGAATTCGTTCTTGTTCGACTCGAATCATTAGAATTCTCTCGTTATAGTTTTATTGAATGTGATTACTGGTAG | 720 | 45.0 | MLLRSCYRPLERCFGRWAGDGLLWHSDLKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLVPYMHKFALEQGGLSEDVIKKAFNATEEEFLRLVKRALPAKPQIASVGSCCLVGAISNKKLYIANLGDSRAVLGRRVSENQRTPVVAERLSTDHNVGVDEIREEVVALHPDDAHIVVYTRGVWRIKGIIQVHFVHEFVLVRLESLEFSRYSFIECDYW | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 3923949 | 3925007 | - | Cp4.1LG04g07670.1 | Cpe04g00317 | 467879 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g00317 | 239 | Gene3D | - | 26 | 214 | IPR036457 | - | |
| Cpe04g00317 | 239 | PANTHER | PROTEIN PHOSPHATASE 2C 63-RELATED | 4 | 213 | - | - | |
| Cpe04g00317 | 239 | CDD | PP2Cc | 42 | 212 | IPR001932 | - | |
| Cpe04g00317 | 239 | ProSitePatterns | PPM-type phosphatase domain signature. | 61 | 69 | IPR000222 | GO:0043169 | |
| Cpe04g00317 | 239 | PANTHER | ALPHABET, ISOFORM E-RELATED | 4 | 213 | - | - | |
| Cpe04g00317 | 239 | SUPERFAMILY | PP2C-like | 43 | 195 | IPR036457 | - | |
| Cpe04g00317 | 239 | Pfam | Protein phosphatase 2C | 56 | 177 | IPR001932 | - | |
| Cpe04g00317 | 239 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 239 | IPR001932 | - | |
| Cpe04g00317 | 239 | SMART | PP2C_4 | 25 | 234 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00317 | Cpe-Chr4:3923949 | Cpe04g00604 | Cpe-Chr4:6319570 | 1.44E-75 | dispersed | |
| Cpe15g00450 | Cpe-Chr15:5604206 | Cpe04g00317 | Cpe-Chr4:3923949 | 1.62E-13 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g00317 | - | K01102 | csv:101216862 | 395.586 |