Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00333 ATGAGAGGGCAGCATTCTCACCCACCGAAGCCGGTTTTCGCCGGACCTGATGACGAAAACGAACCGGGTCGTTCTTATCTCGCCGGAACGAACGCCCCATTAGGCGCTGGGATTCGGAAGAAGGGGACCGGAGTTCGGCCATGGCTGCTTCTGGACTTGACTGGTGGAGCTCAGGTCGTTGAGGCCGGAAAGCACGCGATTATGCGGCGGACTGGTTTGCCCGCGCGAGACCTCCGAATTCTCGATCCGATGCTCTCGTATCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCTATTATCACCGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCAGTAACCCCCTTTGTCGAGGAGCTTCAGAGGCGGGTTCTGCGGCACTACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGTGATGATTCCAGTTGGAGAAATCTCTATGACTTGGAGGAGCCACGATCCAGGGCTCAAAGTCCCCATAATCCCTATCAAGGATTTCCACAGGCTGAAGAGGAAGAGGGGAAGGAAAATGGTAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTACCGTTCGAGTTCGTCGCGTTGGAGGCTTGCCTTGAAGCTGCCTGTAGCTGCTTAGAAAGTGAAGCAGATACGTTGGAGCAAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGTGTGCGTCAAATCAAAAGTCGATTGGTTGCGATAACTGGACGAGTTCAAAAGGTGAGGGACGAATTAGAGCACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCCCGAGAGAGACGAAATGGACGATGATGTTCAGCAATTAGGCAAAGATGACAGGGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAAATTCTGCTAATTATGAAGGCAATATAGATGCTTCACAGGATCATTTATTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGAACCCGGACAAGCACTACCCATAGCGCTGTAAGCAAACTCCTCGATGTCGAGGAGCTAGAGATGCTGTTGGAGGCTTACTTTGTGCAAATTGATGGTACACTCAACAAACTTTCAACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTAGATGACAAGCAGAATCATCTTTTACAAATGGGAGTAATGTTGACAACTGCTACCCTCGTCGTGAGTGCTTTCGTCGTGGTAGCGGGTATCTTCGGGATGAACATCCATATTGAACTATTCGAACCAGAAAAAGCAGGCATGCCGGAGTTCATGTGGACTGTTGGTGGTGGCACCATGGGAACCATCTTCCTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTTTGCTCGAGTAG 1497 48.96 MRGQHSHPPKPVFAGPDDENEPGRSYLAGTNAPLGAGIRKKGTGVRPWLLLDLTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHYQATKAAQEGNGDDSSWRNLYDLEEPRSRAQSPHNPYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIPERDEMDDDVQQLGKDDRDDSIPAEISLEGGGNSANYEGNIDASQDHLFGASNVGRDSHGTRTSTTHSAVSKLLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFMWTVGGGTMGTIFLYVIAIAWCKHKRLLE 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4076562 4080749 - Cp4.1LG04g07410.1 Cpe04g00333 467895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00333 498 Pfam CorA-like Mg2+ transporter protein 382 488 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe04g00333 498 MobiDBLite consensus disorder prediction 352 371 - -
Cpe04g00333 498 CDD Mrs2_Mfm1p-like 48 496 IPR039204 -
Cpe04g00333 498 MobiDBLite consensus disorder prediction 304 328 - -
Cpe04g00333 498 MobiDBLite consensus disorder prediction 163 191 - -
Cpe04g00333 498 MobiDBLite consensus disorder prediction 1 32 - -
Cpe04g00333 498 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 32 498 - -
Cpe04g00333 498 Coils Coil 211 231 - -
Cpe04g00333 498 MobiDBLite consensus disorder prediction 293 345 - -
Cpe04g00333 498 Gene3D - 38 119 - -
Cpe04g00333 498 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 32 498 IPR039204 -
Cpe04g00333 498 Gene3D Magnesium transport protein CorA, transmembrane region 157 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00333 Cpe-Chr4:4076562 Cpe12g00161 Cpe-Chr12:1043975 1.62E-100 dispersed
Cpe04g00333 Cpe-Chr4:4076562 Cpe02g01612 Cpe-Chr2:13498264 1.07E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00333 - - mcha:111017360 841.262