Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00356 CGCCACAAACTGTTGACACAGCGATTGGTTTGGTGGCTCAGATTTTCCGTCGCTCTATTGCCATTGTCCTCTTCCATGTCCGATTGCACCAATTGCCATGGCCGCAAGAATGGACACGTAAAGCATTGCCAGCCTTTCTGGGATGGGGTTTCTGGGTTTGTTTTTAAACTAGCCAATGGTTCTCACTGTATTCAACTTGGGTGTATTGGATTCATGAGCTTGGACACTATGTTGGAACCGGTGAGTTGCTGCCAGACCTCGCAGTCTCAGATTTACAGTGTAGTTAAACAGAAGAATCCTTTAAGAGCCTACTCTCATACTGTTCATCAACATTGTGGATCTTCCTTCAACTTACATTATTCACGCTCGAAGAAAGTGGCCATTTCATCAAGCATCATAAGTTGCTGGAGGAATGACTATTCTTTTCTCACTATACAATCCCACAACAATGCTACTGCGTTAAACATCAAATTAGTTGGACGAAATGGATACAATTGGTATAATCATAGGCATAAACCAAGGCAAAGATCAAGAATGCATGCAGCTATTGATGTTGCAGCTGCTGTGGATGTCATCAACGATTTAGGATTGGACACACTGACATTCCTAGCTGTGACTGTCATAGTTGTTCCTCTATTTAGGAGAATTAAAGCTAGCCCTATTCTTGGTTTCTTCTTTGCTGGGATTGTACTTAATCAATTTGGTGTGATTAGAAATCTTACAGATGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGTTTGGAGCTTTCATTTGCGCGTCTAAAAGCTCTTGCAAGGTTTGCGTTCGGCATGGGTTTGACACAGGTCATGTTATCGACTATCGCTTTCACAGCGTTTGAACTTCCCCCTAATGGAGCTATTGGAACAAGGATTTTGGAGTTCCTTTTTCACGCCAGATCTGACTTGGTTAACATCAGAAGCGTCGATGAAGCGATTGTGATCGGTGCTGCCCTCTCTCTATCTTCTTCAGCGTTCGTCTTACAGCTTCTTGCAGAGAAAGGAGAGCTTGCAACAAGATTTGGGTCAGCAACTCTAGGGATACTTCTTCTTCAGGATATTGCTGTTGTCCCTCTCTTGGTCATACTTCCTGTTCTTGAGAGCCAGAATTTGGGCACGGAAAGTATCTGGCCAATGCTTGCACAAGAAAGTCTCAAGGCTTTAGGTGGACTCGGTCTGCTGTCCCTTGGAGGAAAGTTGATTCTTAGGCGAGTTTTCGAGGTCGTTGCGGAAGCAAGAAGCTCAGAGGCTTTTGTGGCTCTTTGCCTGCTGACCGTTGCTGGCACATCACTAATCACTCAGAAACTGGGCTTTAGTGACACGCTGGGAGCATTTTTGGCTGGAGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCTGATATTAGGCCATTTAGGGGCTTGCTCCTCGGGTTATTCTTTGTTACGACCGGGACCTCCATTGATACGCAGCTCCTGTTTCGAGAATGGCCGAATGTCCTTGCCCTTTTGGCTGGTTTAATAGCCATCAAGACGCTTATAATAACAGCAATAGGTCCCCGTGTCGGTCTCACAACTCAAGAAAGTGTACGAATAGGATTTCTTCTATCGCAAGGAGGCGAGTTCGGGCTTGGAGTGTTACCACTTGAGTTAAACAAGCTACTCATCATTATTGTTGTCTTGTCAATGGCTCTAACCCCGTTGCTTAACGAAGCTGGACGAAAGGCATCTGAATACATCAGTGAAAAGTACAAGACAGACGATAAAGCTGCAGACACGGTGAATTTCGACGCTACCGAACCTGTTATCATCGTTGGATTCGGTCAAATGGGTCAGGTCCTGGCAAATTTCTTATCTACACCTTTGGTATCTGGAGCTGATGGCAGCTCTCCTGGATGGCCTTATGTAGCGTTTGATATCGATCTTTCCGTAGTGAAGAGGTCAAGAAAACTTGGTTTTCCCGTTCTCTACGGAGACGGATCACGACCAGCAGTTCTGCAATCTGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGATCACGGAGAAGAAGGCAACAATCGAGGCTGTTCAAAAGCTCCGTCTCGCCTTCCCTGCGATCCCGATTTACGCCCGAGCTAAAGACGTGATGCATCTGTTAGATTTAAAGAATGCCGGTGCGACGGATGCTATTCTCGAAGATGCTGAGACTAGTTTACAACTTGGGTCAAAGCTTTTGAAAGGGCTCGGTGTCATGTCCGACCAAGTGTCGTTCCTTAGTCAGATGGTTCGAAACTCTATGGAAGTACGAGCACAAGATGCACTCGACAAATCCAACGAGCAAGAGTTAGAGATTATGAAACCACTGCAGATACGTGTGAAGGACTCGATCATGACCCCGGAGAGCGAACTGTCGAGGCTGAACAGCAAAGAAATGGATGAAAGGAAGCAAGAAGATTTAGATGGAAAAGGAGTCCTGTACTGTGAACTTGATACAGAGGAAAACAGTTCAGATCCTGATAATATGGTACAGCCTCCAACCCCTTACATCACAGCCACTGATGCCTTAGAAAACTGA 2580 45.19 RHKLLTQRLVWWLRFSVALLPLSSSMSDCTNCHGRKNGHVKHCQPFWDGVSGFVFKLANGSHCIQLGCIGFMSLDTMLEPVSCCQTSQSQIYSVVKQKNPLRAYSHTVHQHCGSSFNLHYSRSKKVAISSSIISCWRNDYSFLTIQSHNNATALNIKLVGRNGYNWYNHRHKPRQRSRMHAAIDVAAAVDVINDLGLDTLTFLAVTVIVVPLFRRIKASPILGFFFAGIVLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALARFAFGMGLTQVMLSTIAFTAFELPPNGAIGTRILEFLFHARSDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLLQDIAVVPLLVILPVLESQNLGTESIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDTQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESVRIGFLLSQGGEFGLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASEYISEKYKTDDKAADTVNFDATEPVIIVGFGQMGQVLANFLSTPLVSGADGSSPGWPYVAFDIDLSVVKRSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMITEKKATIEAVQKLRLAFPAIPIYARAKDVMHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFLSQMVRNSMEVRAQDALDKSNEQELEIMKPLQIRVKDSIMTPESELSRLNSKEMDERKQEDLDGKGVLYCELDTEENSSDPDNMVQPPTPYITATDALEN 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4207737 4217222 - Cp4.1LG04g07240.1 Cpe04g00356 467918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00356 859 MobiDBLite consensus disorder prediction 803 859 - -
Cpe04g00356 859 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 608 746 IPR036291 -
Cpe04g00356 859 Gene3D - 194 585 IPR038770 -
Cpe04g00356 859 ProSiteProfiles RCK N-terminal domain profile. 608 740 IPR003148 GO:0006813
Cpe04g00356 859 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 144 808 - -
Cpe04g00356 859 Pfam TrkA-N domain 609 732 IPR003148 GO:0006813
Cpe04g00356 859 MobiDBLite consensus disorder prediction 807 829 - -
Cpe04g00356 859 Pfam Sodium/hydrogen exchanger family 202 576 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe04g00356 859 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 144 808 - -
Cpe04g00356 859 Gene3D - 608 778 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01717 Cpe-Chr3:13023869 Cpe04g00356 Cpe-Chr4:4207737 4.41E-73 dispersed
Cpe04g00356 Cpe-Chr4:4207737 Cpe08g00524 Cpe-Chr8:3388541 3.00E-69 dispersed
Cpe15g00398 Cpe-Chr15:5172010 Cpe04g00356 Cpe-Chr4:4207737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00356 - - csv:101209266 1267.68