Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00386 ATGGCTGCAACGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAATCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCTCGCAAGCTTGTCATCGTTGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCTGTTAAGGGTGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGATTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGACGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACCCAGCTTCTACTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCAGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTTAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGCTGGCGGAGATCAAGCATGCGAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGAGCTCTTGGATTGTAG 777 54.44 MAATAATSGALLNGLGSPFLHGGSRTQILLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4501464 4503791 - Cp4.1LG04g06930.1 Cpe04g00386 467948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00386 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 258 - -
Cpe04g00386 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Cpe04g00386 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 258 IPR001344 GO:0009765|GO:0016020
Cpe04g00386 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
Cpe04g00386 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00386 Cpe-Chr4:4501464 Cpe13g00676 Cpe-Chr13:6360083 3.38E-179 dispersed
Cpe04g00386 Cpe-Chr4:4501464 Cpe10g00945 Cpe-Chr10:5300445 3.53E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00386 K08917 - csv:101204705 496.508