Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00441 ATGGAGCAAGGTTCTGGGTTTGCCACTTCCTCCCCCGCTTCTCAGCTTTCGGGAGCGTACCTCACAAGGAATTTACTACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGTACTTCGCCCCTCTATGTTTACTCGAGTACGTTTGCAGGGAAGTTACTGACACATCGAACTGAGGAAGTAGTATTTGGTGCATTTTCCTTGATCTTCTGGACTCTTACACTGATACCATTGTTGAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTTCTCTGTCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCTGATGAGGAGCTCTCAGCTTACAAATATGGACCATCTTCTCACGTAGTAGCCCCTTCTCCACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGATGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTGACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTAAAAGTTACTGAAGCAAAATTGTCCAATGGGACACTCCTTTTGATTGCTTGTGTCATATTGGTTGGTCTGTTTGCCCTGCAGCACTGTGGCACCCATAAGGTTGCGTTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTTTGTACAACATAATACGTTGGAACCCAAGTATTGTACGCGCAATTTCCCCTCATTATGTTATCAAGTTCTTAAGAGTCACCGGTAAAGACGGTTGGCTTTCTCTTGGAGGGGTTCTTCTGGCCATAACTGGTACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCTATAAGGCTTGCTTTTGTATTCATTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTCATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTATCATTGCTACCCTGGCGGCTATTGTGGGGAGCCAAGCTGTGATTACTGCTACGTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTTACTCTTTCCATTACGATCGGGTTTCAAGATACGACAATGATTGGAAATGCTTACGGACTCGCTTGCATGACAGTTATGTTCACGACGACATTTCTTATGGCACTCGTCATTGTATTTGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTCATCATCTTCTTCTGGTCTGTCGAGGCTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTGTCAGCGTTTTTTATGATTGTTATGTTCGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTCTCACTGAAGTGGTTGCTTGGACTAGGCCCGAGTCTTGGTATAGTTCGCGTCCCGGGAATTGGTCTCATATACTCGGAATTGGCAACAGGAGTTCCTGCAATATTTTCCCACTTTGTGACGAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTCGTGTGCGTAAAGTCTGTTCCTGTTCCGTATGTCTCACCCGAAGAACGTTTTCTCATTGGGAGGGTCTGTCCTAGACCGTATCGCATGTATCGATGCATAGTGAGGTATGGCTACAAGGATATTCAGAAGGATGATGGAGACTTTGAGAACCAGTTGATACTAAACATTGCAGAATTCATACAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCCGAAAACTCTTCAATCGATGGGAGGATGGCCGTGATAAGCACACGAAGCATACAATCGAACTTGAGCTTCATAGTATCGGGGCACGAAGAAGTTGGTACCAGCAACTCCATCCACAGCAGCAAATCTGCCACACTCCATAGTTTACGATCCGCCTACGAGGATGAGAACCCACAACTAAGAAGACGCCAGGTACAGTTTCAGTTATCTCCCAGCCCTTCAATAGACCCTAGAGTTAGGGAAGAGTTGATGGACTTGATCCAAGCCAAGGAGGCCGGTGTAGCATATATAATGGGACACTCATACGTCAAGGCTAGAAGATCGTCGTCATACTTGAAAAAGCTCGTAATAGATATCGGTTACTCATTCCTCCGAAAGAACTGTCGAGGCCCGTCTGTGGCGCTCAACATCCCTCACATCAGTCTAATTGAAGTGGGGATGATCTATTATGTCTAG 2355 43.95 MEQGSGFATSSPASQLSGAYLTRNLLLAYQSFGVVYGDLSTSPLYVYSSTFAGKLLTHRTEEVVFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVVAPSPLKRFLERHKTLRMVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLKVTEAKLSNGTLLLIACVILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIRWNPSIVRAISPHYVIKFLRVTGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRLAFVFIIYPCLVVQYMGQAAFLSKNLHLFPNSFYDSIPEPVFWPVFIIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTMIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFIIFFWSVEAAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSENSSIDGRMAVISTRSIQSNLSFIVSGHEEVGTSNSIHSSKSATLHSLRSAYEDENPQLRRRQVQFQLSPSPSIDPRVREELMDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5169435 5174834 - Cp4.1LG04g06470.1 Cpe04g00441 468003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00441 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00441 784 PANTHER POTASSIUM TRANSPORTER 4 21 784 - -
Cpe04g00441 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00441 784 TIGRFAM kup: potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00441 Cpe-Chr4:5169435 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe02g01189 Cpe-Chr2:10820585 Cpe04g00441 Cpe-Chr4:5169435 0 transposed
Cpe03g00669 Cpe-Chr3:4007424 Cpe04g00441 Cpe-Chr4:5169435 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00441 K03549 - csv:101208973 1466.83