Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00457 ATGGCCATCTCAGAATCTCAGACCCGTTCCTCTCTGATTCCTACTTTCCTCTACTCGTCTTCGGCCATTCCGTTCCAGAAGATGCTTCGCTCCAATGATCCTTGTGTATTGCCGTCGCCATCGCCATCTCCGATTGTCGAATCTACACCGAGAAAGGCCTTCGCGATTCCGTCTCCGAGTGAACCGAGAAAGAAACTGGAGATGTATTCGCCGGCTTTCTACGCTGCCTGTGCCGTCGGTGGAAGCCTCAGTTGTGGTCTCACTCACACGGCCGTCACTCCTCTCGATCTCATCAAGTGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTTCTAAAGGAGCAGGGAATCAGGGGCTTTTTCAGGGGTTGGGCGCCAACTTTTCTGGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGTATCTATGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAAGTACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCATTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCTGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTTGGGTTGTACAAGGGTATTGTTCCTCTATGGGGGCGTCAGATCCCATATACAATGATGAAATTTGCAACATTTGAGAATCTGGTGGAGCTCATCTACAAGCATGTCATTCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTGGGCGTCAGCTTTGCTGGTGGATATATTGCGGGAGTTTCTTGTGCTATAGTTTCTCACCCTGCAGACAATCTGGCTGTGAAGAAGCTTGGAGTATGGGGTCTCTTTACACGAGGGCTGCCCCTACGCATAGTCATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTACGACGCATTCAAAGTTTTTGTCGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCCCCGCCGCCGCCGCCATTGAACTTCCAAGTGCGTAG 1077 49.68 MAISESQTRSSLIPTFLYSSSAIPFQKMLRSNDPCVLPSPSPSPIVESTPRKAFAIPSPSEPRKKLEMYSPAFYAACAVGGSLSCGLTHTAVTPLDLIKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWAPTFLGYSAQGACKYGIYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVFVGLPTTGGVAPAPAAAAIELPSA 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5276761 5281421 + Cp4.1LG04g06260.1 Cpe04g00457 468019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00457 358 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 352 - -
Cpe04g00457 358 SUPERFAMILY Mitochondrial carrier 74 331 IPR023395 -
Cpe04g00457 358 Gene3D Mitochondrial carrier domain 73 335 IPR023395 -
Cpe04g00457 358 Pfam Mitochondrial carrier protein 74 158 IPR018108 -
Cpe04g00457 358 Pfam Mitochondrial carrier protein 173 257 IPR018108 -
Cpe04g00457 358 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 352 IPR044677 GO:0005315|GO:1990547
Cpe04g00457 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Cpe04g00457 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00457 Cpe-Chr4:5276761 Cpe13g00493 Cpe-Chr13:5069505 0 dispersed
Cpe18g00933 Cpe-Chr18:8237124 Cpe04g00457 Cpe-Chr4:5276761 0 wgd
Cpe03g00655 Cpe-Chr3:3901479 Cpe04g00457 Cpe-Chr4:5276761 1.08E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00457 K15102 - csv:101203018 586.26