Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00490 ATGGATATCATAATCTCTCTCTTCTCCATCTCCATTTTCATCTTCCTCCTCCTCAAATTCCGGCCACCCGCCGCCCTCTTTCCCAGCCACTCTTCTCCGTCGACGTACCCTCTCATCGGCTGTCTCCTCTCCTTCTACAAGAACCGCCACCGCCTGTTGGATTGGTACACTGAGCTCTTGTCCAAATCCGCCACTGGCACTATTGTCATCCGCCGCCTCGGCTGCCGGCGGACGGTGGTGACGACGAACCCAGTTAATGTTGAGTATATTTTGACGACCCATTTCCTTAATTTTCCTAAAGGGAAACCTTTCACTGAGATTTTGGGCGACTTTCTTGGCTGTGGAATTTTCAATGTCGACGGCGAGCTATGGCGGACGCAGCGGAAGTTGGCTAGCCATGAGTTTAGCGCAAAATCGCTGCGGGAATTCGTCGTCAAGACATTGGAGTTGGAGGAGTTACTAAGAGGGTTTGCATTCAGTGTAATATGCAAGGTTTTATTGGGAGGTGAAGAAGAAGCCATTTCCGAGCTCGAAAAGAGCTTCGATGTAGCGTCGGAGGTGAGCGCCGGGCGGGCGACGAAGCCAGTTTACATGATATGGAAACTGAAGAGATGGTTTGGTGTCGGGTCAGAGCGGCGGTTGAAGATGGCGGTGGCGGAAGTTCACCGGAAGGTGATGAACATCATTGAGAAGAGAAAGAAGAAGAAGATCCAGGATTTCCATGACAGCGAAGATCTCTTGTCCAGGTTGATCTCTGTTGGCCATGACGACGAGGTAATTCGAGACATGGCCATAAGCTTCATCATGGCAGGTCGAGACACAACATCGGCTGCCATGACATGGCTGTTTTGGCTACTCACCCGTCACCCCAACGTCGAGAAACAATTAGTAGAAGAAATAGACTTTGAATCAACTTTGGTAGTCGAAAAGAAATTTGATTATAAATCTCTCAAGGAGCTCAAATTTCTGAAGGCATGCCTTTGCGAAACCATGCGACTCTACCCACCAGTCCCATGGGATTCCAAGCATGCCATTGTCAACGACTGCTTGCCCGACGGGACTCCGGTTCAGGCTGGCGACAAAGTGACATATTTCCCATATGGGATGGGTAGGATGGAGGCAGTATGGGGAAAGGATCGGTTCGAGTTCAAGCCGAGCCGATGGCTGCTAGAACCAGAGGGTCGTGGACGGAGAAGAGGCGTGAAATTAGTGAGTCCATACAAGTTTCCAATATTTCAAGCCGGACCAAGGGTGTGTTTAGGAAAAGAGATGGCTTTCATTCAGATGAAGTACGTAGTAGCTTCAATTCTCAGTCAATTCAGAATCAAACCCATCGTCGCCGCCTCCGACTCCGACGACCCTGTGTTTGTGCCGCTGCTAACGGCACACATGGCCGGCGGCTTCAAAGTTCTGTTTCAGAGGAGAGAGAAAGAGAAAGAGAGAGAAAATTCAAAACATACAAAATTACCAATTTAA 1476 49.39 MDIIISLFSISIFIFLLLKFRPPAALFPSHSSPSTYPLIGCLLSFYKNRHRLLDWYTELLSKSATGTIVIRRLGCRRTVVTTNPVNVEYILTTHFLNFPKGKPFTEILGDFLGCGIFNVDGELWRTQRKLASHEFSAKSLREFVVKTLELEELLRGFAFSVICKVLLGGEEEAISELEKSFDVASEVSAGRATKPVYMIWKLKRWFGVGSERRLKMAVAEVHRKVMNIIEKRKKKKIQDFHDSEDLLSRLISVGHDDEVIRDMAISFIMAGRDTTSAAMTWLFWLLTRHPNVEKQLVEEIDFESTLVVEKKFDYKSLKELKFLKACLCETMRLYPPVPWDSKHAIVNDCLPDGTPVQAGDKVTYFPYGMGRMEAVWGKDRFEFKPSRWLLEPEGRGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFIQMKYVVASILSQFRIKPIVAASDSDDPVFVPLLTAHMAGGFKVLFQRREKEKERENSKHTKLPI 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5518571 5521218 + Cp4.1LG04g06030.1 Cpe04g00490 468052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00490 491 Pfam Cytochrome P450 146 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 Pfam Cytochrome P450 33 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 Gene3D Cytochrome P450 25 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PANTHER CYTOCHROME P450 11 475 - -
Cpe04g00490 491 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe04g00490 491 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 11 475 - -
Cpe04g00490 491 SUPERFAMILY Cytochrome P450 33 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00490 Cpe-Chr4:5518571 Cpe05g00048 Cpe-Chr5:255317 3.66E-135 dispersed
Cpe18g00897 Cpe-Chr18:8079669 Cpe04g00490 Cpe-Chr4:5518571 0 wgd
Cpe03g00622 Cpe-Chr3:3717285 Cpe04g00490 Cpe-Chr4:5518571 0 wgd
Cpe04g00490 Cpe-Chr4:5518571 Cpe04g01611 Cpe-Chr4:12527159 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00490 K20665 - csv:101207598 735.717