Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00529 ATGGAGTCACTCGTTGATGGTATGAGTTCTTTACTTAAAACTCAGAACCCGACATCTACAGTGAGGATTCTCGATTCGTCGTGCCACCTTTCTGCTAAACAATCAAGGGATGAAGCTAGTTCTTCGACATCCTACGTTACATCTCAGAATTGTGCCAAGAAACCTGTTCGTCATCCAAATGGTTCTTCTGTAAGTATTAAAAAACAACCCGGTTCGCAGCTTGAAGGTTCAACTGATGTGAAAAAACATACACATGTTTCCAATAAGGGGAAATCTGAGCTTGTAAACCCGACGGATGTTTCGTATAAATCGACTGAAACCTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGGAGCAAAACCTCTTGTGAAGCATGGTATTGAAGATTCTAAGGATTGTTGTTCAAGTGGTTTGGAAGAATCTGGAAATCGAGTATTAAACGCCTCGAAAGGAGATTCCACAAAAACAAATGATCAACAAAAGTCTCAGCCAGATGAAATTTCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACGTTATATGCCGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGTATTAAAAAGTCTTGTGAAAGCATTGACATCACAAGTTCCTACGATCTCGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACCGGCAGTGATATCAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTATAAGCCCCATAAGGCAAATGATACAAGATGGGAAGCAATGCAAGTCGTGAGGTCTCATGATGGGATGTTAGGACTGAATCATTTCAGGTTGCTGCGGAGACTGGGATGTGGCGATATCGGTAGTGTCTATCTTTCGGAGTTAACCGGTACCAAAACTTATTTTGCAATGAAGGTTATGGATAAAGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACCGAGCGCGAGATATTGCAATCTCTGGATCATCCTTTCCTTCCTACTTTGTATACACACTTCGAGACAGAGAAGTTCTCTTGCTTGGTAATGGAGTTTTGCCCAGGAGGCGACTTGCACGCGCTTAGGCAGAGGCAACCCGGAAAATTCTTCCCGGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTTCTTGCATTGGAGTATCTGCACATGCTTGGGATAATCTATAGGGACCTAAAACCCGAAAATGTGTTGGTTAGAGATGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCGGTTTCCCCGACCCTTGTTAAGTCATCAAACACGGGTTTAGAATCTAAAAGCTCGGGCTACTGTGCTCAGCCTGCTTGCATTGAGCCGACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCGTGTTTTACGCCTCGCTTCCTGAGCAGGCACAGGAAAGAAAAAAAGTCGAAACCAAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCTGAGCCCACAAGTGCGAGATCGATGTCCTTTGTCGGTACACATGAGTACCTCGCACCTGAAATCATAAAAGGTGAGGGTCATGGCAGTGCTGTGGATTGGTGGACTTTCGGGATCTTTCTCTACGAGCTTTTGTTCGGTAGAACGCCATTCAAGGGAGCTGGGAACCGAGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCAGAGGCTTGCTCGTAAAAGAACCACAGCACCGTCTTGCTTATAGGCGTGGTGCTACCGAGATCAAACAACATCCGTTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCAGAAGTGCCAAGAGTAGATGCCATTGATTTCTCTTCAAGAATGGAGACACCACACGCACCGGCAGGCGAAAAAACGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2007 45.39 MESLVDGMSSLLKTQNPTSTVRILDSSCHLSAKQSRDEASSSTSYVTSQNCAKKPVRHPNGSSVSIKKQPGSQLEGSTDVKKHTHVSNKGKSELVNPTDVSYKSTETSFQKKVPLEGGGAKPLVKHGIEDSKDCCSSGLEESGNRVLNASKGDSTKTNDQQKSQPDEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIKKSCESIDITSSYDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNTGLESKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDAIDFSSRMETPHAPAGEKTPGVDVKPSGNYLEIDFF 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5753669 5757695 - Cp4.1LG04g05550.1 Cpe04g00529 468091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00529 668 PANTHER FLIPPASE KINASE 1-RELATED 11 668 - -
Cpe04g00529 668 SMART serkin_6 276 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00529 668 MobiDBLite consensus disorder prediction 137 174 - -
Cpe04g00529 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Cpe04g00529 668 MobiDBLite consensus disorder prediction 34 77 - -
Cpe04g00529 668 SUPERFAMILY Protein kinase-like (PK-like) 251 634 IPR011009 -
Cpe04g00529 668 ProSiteProfiles Protein kinase domain profile. 276 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00529 668 Gene3D Transferase(Phosphotransferase) domain 1 360 428 - -
Cpe04g00529 668 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 11 668 - -
Cpe04g00529 668 CDD STKc_phototropin_like 275 635 - -
Cpe04g00529 668 Gene3D Phosphorylase Kinase; domain 1 274 359 - -
Cpe04g00529 668 MobiDBLite consensus disorder prediction 224 247 - -
Cpe04g00529 668 Gene3D Transferase(Phosphotransferase) domain 1 507 630 - -
Cpe04g00529 668 Pfam Protein kinase domain 277 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00529 668 Pfam Protein kinase domain 509 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00529 668 MobiDBLite consensus disorder prediction 34 174 - -
Cpe04g00529 668 MobiDBLite consensus disorder prediction 90 111 - -
Cpe04g00529 668 MobiDBLite consensus disorder prediction 222 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00529 Cpe-Chr4:5753669 Cpe10g01239 Cpe-Chr10:9546367 0 dispersed
Cpe11g01082 Cpe-Chr11:9033317 Cpe04g00529 Cpe-Chr4:5753669 3.46E-142 dispersed
Cpe03g00586 Cpe-Chr3:3529869 Cpe04g00529 Cpe-Chr4:5753669 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62336 PF00069 Pkinase 7.00E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00529 K08286 - csv:101219962 1209.51