Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00529 | ATGGAGTCACTCGTTGATGGTATGAGTTCTTTACTTAAAACTCAGAACCCGACATCTACAGTGAGGATTCTCGATTCGTCGTGCCACCTTTCTGCTAAACAATCAAGGGATGAAGCTAGTTCTTCGACATCCTACGTTACATCTCAGAATTGTGCCAAGAAACCTGTTCGTCATCCAAATGGTTCTTCTGTAAGTATTAAAAAACAACCCGGTTCGCAGCTTGAAGGTTCAACTGATGTGAAAAAACATACACATGTTTCCAATAAGGGGAAATCTGAGCTTGTAAACCCGACGGATGTTTCGTATAAATCGACTGAAACCTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGGAGCAAAACCTCTTGTGAAGCATGGTATTGAAGATTCTAAGGATTGTTGTTCAAGTGGTTTGGAAGAATCTGGAAATCGAGTATTAAACGCCTCGAAAGGAGATTCCACAAAAACAAATGATCAACAAAAGTCTCAGCCAGATGAAATTTCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACGTTATATGCCGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGTATTAAAAAGTCTTGTGAAAGCATTGACATCACAAGTTCCTACGATCTCGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACCGGCAGTGATATCAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTATAAGCCCCATAAGGCAAATGATACAAGATGGGAAGCAATGCAAGTCGTGAGGTCTCATGATGGGATGTTAGGACTGAATCATTTCAGGTTGCTGCGGAGACTGGGATGTGGCGATATCGGTAGTGTCTATCTTTCGGAGTTAACCGGTACCAAAACTTATTTTGCAATGAAGGTTATGGATAAAGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACCGAGCGCGAGATATTGCAATCTCTGGATCATCCTTTCCTTCCTACTTTGTATACACACTTCGAGACAGAGAAGTTCTCTTGCTTGGTAATGGAGTTTTGCCCAGGAGGCGACTTGCACGCGCTTAGGCAGAGGCAACCCGGAAAATTCTTCCCGGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTTCTTGCATTGGAGTATCTGCACATGCTTGGGATAATCTATAGGGACCTAAAACCCGAAAATGTGTTGGTTAGAGATGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCGGTTTCCCCGACCCTTGTTAAGTCATCAAACACGGGTTTAGAATCTAAAAGCTCGGGCTACTGTGCTCAGCCTGCTTGCATTGAGCCGACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCGTGTTTTACGCCTCGCTTCCTGAGCAGGCACAGGAAAGAAAAAAAGTCGAAACCAAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCTGAGCCCACAAGTGCGAGATCGATGTCCTTTGTCGGTACACATGAGTACCTCGCACCTGAAATCATAAAAGGTGAGGGTCATGGCAGTGCTGTGGATTGGTGGACTTTCGGGATCTTTCTCTACGAGCTTTTGTTCGGTAGAACGCCATTCAAGGGAGCTGGGAACCGAGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCAGAGGCTTGCTCGTAAAAGAACCACAGCACCGTCTTGCTTATAGGCGTGGTGCTACCGAGATCAAACAACATCCGTTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCAGAAGTGCCAAGAGTAGATGCCATTGATTTCTCTTCAAGAATGGAGACACCACACGCACCGGCAGGCGAAAAAACGCCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA | 2007 | 45.39 | MESLVDGMSSLLKTQNPTSTVRILDSSCHLSAKQSRDEASSSTSYVTSQNCAKKPVRHPNGSSVSIKKQPGSQLEGSTDVKKHTHVSNKGKSELVNPTDVSYKSTETSFQKKVPLEGGGAKPLVKHGIEDSKDCCSSGLEESGNRVLNASKGDSTKTNDQQKSQPDEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIKKSCESIDITSSYDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNTGLESKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDAIDFSSRMETPHAPAGEKTPGVDVKPSGNYLEIDFF | 668 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5753669 | 5757695 | - | Cp4.1LG04g05550.1 | Cpe04g00529 | 468091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00529 | 668 | PANTHER | FLIPPASE KINASE 1-RELATED | 11 | 668 | - | - | |
Cpe04g00529 | 668 | SMART | serkin_6 | 276 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 137 | 174 | - | - | |
Cpe04g00529 | 668 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 397 | 409 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 34 | 77 | - | - | |
Cpe04g00529 | 668 | SUPERFAMILY | Protein kinase-like (PK-like) | 251 | 634 | IPR011009 | - | |
Cpe04g00529 | 668 | ProSiteProfiles | Protein kinase domain profile. | 276 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00529 | 668 | Gene3D | Transferase(Phosphotransferase) domain 1 | 360 | 428 | - | - | |
Cpe04g00529 | 668 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL3 | 11 | 668 | - | - | |
Cpe04g00529 | 668 | CDD | STKc_phototropin_like | 275 | 635 | - | - | |
Cpe04g00529 | 668 | Gene3D | Phosphorylase Kinase; domain 1 | 274 | 359 | - | - | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 224 | 247 | - | - | |
Cpe04g00529 | 668 | Gene3D | Transferase(Phosphotransferase) domain 1 | 507 | 630 | - | - | |
Cpe04g00529 | 668 | Pfam | Protein kinase domain | 277 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00529 | 668 | Pfam | Protein kinase domain | 509 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 34 | 174 | - | - | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 90 | 111 | - | - | |
Cpe04g00529 | 668 | MobiDBLite | consensus disorder prediction | 222 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00529 | Cpe-Chr4:5753669 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe11g01082 | Cpe-Chr11:9033317 | Cpe04g00529 | Cpe-Chr4:5753669 | 3.46E-142 | dispersed | |
Cpe03g00586 | Cpe-Chr3:3529869 | Cpe04g00529 | Cpe-Chr4:5753669 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62336 | PF00069 | Pkinase | 7.00E-36 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00529 | K08286 | - | csv:101219962 | 1209.51 |