Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00554 | ATGAAGGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGGTAGACGAAGGCGGCGGCGGCGGCGGCGGTGGTGGTGGTGGAAAGCTGCCGATCGCCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTTGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACAGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGATGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTCGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCGGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAATGTAATGAAGCGATGTTGGGACGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTACCGAGGTCCTTGAACGATGGCAGCAGCAATAATGCAACGTCGAAGATTCGGATTGTAATTTGTCCAATTGAAAAGGAACTGGAACTTGAGAATGAAGGGAACAAGTAG | 1134 | 46.83 | MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKVDEGGGGGGGGGGGKLPIARQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVPRSLNDGSSNNATSKIRIVICPIEKELELENEGNK | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5962969 | 5967105 | + | Cp4.1LG04g05350.1 | Cpe04g00554 | 468116 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00554 | 377 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | PRINTS | Tyrosine kinase catalytic domain signature | 207 | 225 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | PRINTS | Tyrosine kinase catalytic domain signature | 317 | 339 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | PRINTS | Tyrosine kinase catalytic domain signature | 169 | 182 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | PRINTS | Tyrosine kinase catalytic domain signature | 273 | 295 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 347 | - | - | |
Cpe04g00554 | 377 | ProSiteProfiles | Protein kinase domain profile. | 72 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00554 | 377 | Gene3D | Phosphorylase Kinase; domain 1 | 60 | 155 | - | - | |
Cpe04g00554 | 377 | Gene3D | Transferase(Phosphotransferase) domain 1 | 172 | 373 | - | - | |
Cpe04g00554 | 377 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 344 | IPR011009 | - | |
Cpe04g00554 | 377 | SMART | serkin_6 | 72 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe04g00554 | 377 | Pfam | Protein tyrosine and serine/threonine kinase | 74 | 344 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe04g00554 | 377 | MobiDBLite | consensus disorder prediction | 32 | 58 | - | - | |
Cpe04g00554 | 377 | CDD | STKc_MAP3K-like | 78 | 342 | - | - | |
Cpe04g00554 | 377 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00554 | Cpe-Chr4:5962969 | Cpe08g00274 | Cpe-Chr8:1762011 | 2.19E-178 | dispersed | |
Cpe18g00839 | Cpe-Chr18:7743553 | Cpe04g00554 | Cpe-Chr4:5962969 | 0 | wgd | |
Cpe03g00561 | Cpe-Chr3:3329868 | Cpe04g00554 | Cpe-Chr4:5962969 | 1.04E-58 | wgd | |
Cpe04g00554 | Cpe-Chr4:5962969 | Cpe04g01549 | Cpe-Chr4:12135714 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62338 | PF07714 | PK_Tyr_Ser-Thr | 1.50E-63 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00554 | - | - | csv:101212631 | 660.603 |