Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00561 ATGGATCTGGAGAGTGCTATTAGGGGTCACTCAATCAAGAAGGATTCTTGGAAAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGTACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTGAGCACTCTGAAACTAATGAGGAGATTTATGGGATTCTTTCTTTTGTTTTCTGGACTCTCACGCTTATTCCTTTGATTAAATACGTTTTTATTGTTCTTCGAGCTGATGATAATGGCGAGGGGGGAACTTTTGCTTTGTACTCATTGCTTTGCCGCCATGCCCGAGTTGGCTCCTTGCCTAATTGTCAGCTCGCAGATGAGGAGCTTTCTGAGTATACAAAAGATGGGGTGGATTTAACCACTAAGAACACTTGTGGGTCGAGATTGAAATCGACATTAGAGAATCATAGAGTGCTGCAGAGGGTTTTGCTTGTTCTTGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACTCCTGCCATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCAATGGCTAAAGAACACCATCGATGTTCGGAAGCAATGTTCGCTGATCTCGGCCACTTCTCGCAGCTATCTATCAAGATTGCGTTTTCTTTTGTGGTTTATCCAGCTTTGGTACTGGCATATATGGGACAAGCTGCTTATCTTTCTCAACATCACGGTGAAGAAAGTAACTATCGGATCGGATTTTACGTGTCGGTTCCTGAGAAAATAAGGTGGCCTGTACTTGTGATAGCCATTTTAGCTGCGGTGGTCGGAAGTCAAGCTGTCATTACCGGGACGTTTTCGATAATAAAACAGTGCTCTGCATTAGGCTGCTTCCCAAGGGTCAAAATTGTTCATACGTCGTCGAAAATCCACGGCCAGATTTACATACCAGAGATCAACTGGACTTTGATGATCTTGTGCTTGGCTATTACTGGTGGCTTTCGAGACACGAAACGAATGGGGAATGCATCAGGTTTAGCGGTAATAACCGTTATGCTAGTGACTACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGAACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTCGGGTTCATCGAGTCACTCTACTTCTCGGCATCTCTCATCAAGTTTCAAGAAGGAGCGTGGGTTCCCATTGCCCTCTCGCTCATCTTCCTACTAGTCATGTACGTATGGCAATACGGAACGCGCAAGAAATACGAGTACGATGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCTTAGGTCCAAGTTTAGGCATTGTACGAGTACGAGGCATTGGTCTTATATACACCGAGCTAGTCTCAGGTATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGTGTAAAATCCGTCCCCGTCCCACACGTGAGACCAGGAGAGAGATTCCTCGTAGGAAGAGTTGGACCAAAGGAGTACCGTTTGTATCGATGCATAGCACGATATGGATACCGCGACATCCACAAGGATGGTATCGAGTTCGAGAAGGACTTGGTGTGTAGCATTGCGGAGTTCATCAGGTCGGAGAAGGTAGAGACGAACATGAAGGTAGAAGATTTGGAAGAGAGCGAGAGAATGACGGTGGTGGGAACGTCGTCGACACACGTAGACGGAGTGAGAATGTGCGAAGATGAAGGAGGAGGAGGAGAGACATCAGAGGTGAGGGAGATAAAGTCAGCACAAAAGGTGAGGAAAAGAGTGAGGTTTGTTGTGCCTGAGAGCCCACAAATGGATGTGGAGGCAAGGAGAGAGCTGGAAGAGCTAATGGAAGCAAGAGAGGCAGGCATGGCTTTCATTATGGGACATTCATATGTGAAAGCAAAGAGAGGGTCAGGTTGGGTGAAGAAAATGGTGATAAATTATGGGTATGATTTCTTGAGAAGGAACTCAAGAGGGCCATCTTATGCTTGGACTGTGCCTCATGCATCTACTTTAGAGGTTGGGATGATCTACCAAGTTTGA 2058 45.63 MDLESAIRGHSIKKDSWKAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIEHSETNEEIYGILSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVGSLPNCQLADEELSEYTKDGVDLTTKNTCGSRLKSTLENHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRCSEAMFADLGHFSQLSIKIAFSFVVYPALVLAYMGQAAYLSQHHGEESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMILCLAITGGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWNKSFLFAIAFILIFGFIESLYFSASLIKFQEGAWVPIALSLIFLLVMYVWQYGTRKKYEYDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDGIEFEKDLVCSIAEFIRSEKVETNMKVEDLEESERMTVVGTSSTHVDGVRMCEDEGGGGETSEVREIKSAQKVRKRVRFVVPESPQMDVEARRELEELMEAREAGMAFIMGHSYVKAKRGSGWVKKMVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6045306 6051422 + Cp4.1LG04g05290.1 Cpe04g00561 468123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00561 685 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 196 685 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00561 685 Pfam K+ potassium transporter 25 189 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00561 685 Pfam K+ potassium transporter 196 518 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00561 685 PANTHER POTASSIUM TRANSPORTER 6 1 194 - -
Cpe04g00561 685 PANTHER POTASSIUM TRANSPORTER 6 196 685 - -
Cpe04g00561 685 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 194 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe04g00561 685 Coils Coil 535 555 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00561 Cpe-Chr4:6045306 Cpe11g00002 Cpe-Chr11:3133 2.07E-85 dispersed
Cpe12g00954 Cpe-Chr12:8086081 Cpe04g00561 Cpe-Chr4:6045306 3.43E-178 dispersed
Cpe01g02356 Cpe-Chr1:19727385 Cpe04g00561 Cpe-Chr4:6045306 0 wgd
Cpe13g00909 Cpe-Chr13:7755145 Cpe04g00561 Cpe-Chr4:6045306 0 wgd
Cpe03g00553 Cpe-Chr3:3247870 Cpe04g00561 Cpe-Chr4:6045306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00561 K03549 - csv:101211664 880.552