Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00570 ATGTGGCTGCAGAAAGGAAACAGCGTGAATGGCACGAAAAAGGGAGGAATAGCCGGAAGAGGAAATGGATTGGTGGCGATCGGCGTTGATAGGGAAAAAGGAAGCCAAAATGCTCTCCGATGGGCCACCGAGCATCTGCTCGTCAAAGGTCAAACCGTGATATTAATCCATGTAGTTCAGAGACCTTCCAGTGCGGCTGCTTATTTGATTGGGGGAGCGATTATTTGTAATAGCGATGGCAGTTTCGCCAGTAATTCCCCTCGTAAACAGCAGCTCGAGATGCAGACTCGTGACATTTTTCTCACCTTCCATTGCTATTGTACTCGTAAGGATATTCAATGCCTTGATATCATATTGGAAGATACTGATGTGGTGAAAGCGTTAACTGAATACGTCTCGTATAGTGCGATCGAAAACTTGGTGCTTGGGGCTCCATCGAAACATGGATTTATGAGGTTTAAGTCGTCGAGCATGGGGAGTAGTGTGTCGAAAGGGGCACCGGATTTCTGCACTGTATATGTCATCTCAAAGGGAAAGGTGTCGTCGGTGAGACATGCCACTCGCTTGGCTCCCGCTGCTTCTCCTCTACTAGACCATTTGCAGAAGTTATCGAAGCCGATCGTAAAGGGAACGGGCACTCCTCAACATAAGTTTAATTTAAGAGATAGGACATCATTCAAGCCTCGGAATTTTCAAGATGAATCAATCAAGCCAGAAATATCTCAGGGAGTGGATAGAACTTCTATTTCCAAATATAGTGGAGGGTTCTCCGAGTCAGAATCCGACATATCCTTCATAAGCTCAGGAAGACCAAGCACGGATCGTACTTCTTCTGTTGCACTTGACTATGAATCCGCCCCACTGCAATATTCAAACAGCTCAGACCAAAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCACAATCAACTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATTTTCCTGTTCTTCTCAGAACTTGGATGAAGCAGAGCTTGAAATGAAGAGGTTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCTTGTAAAGAAGCACTAACAGCAAAGCAGAAGGCAAGGGAACTAAATAACTGGAGATGTGAAGAAGAACAGAAACTAGAAGAGGCGCGGCTTGCACAAGAAGCAGCAATGGCTATTGCAGAGCAGGAGAGAGCGAGATGCCGAGCAGCGATGGAAGCAGCTGATGCAGCTAAGAAAATAGCCGAGTTAGAATCATATAAAAGAGAAAATCTAGAGATAGAAGCACTTAAAGAAGCAGAGGAAATGCAAAGAGCATTGAAAAATCTTGCACAAAGTGACATCAGATACAGGAGATATACAATTGAGGAGATTGAATCAGCAACAGAAAATTTTGCACAATCTCGGAAGATAGGGGAAGGAGGTTATGGACCTGTTTTTCGTTGTCGTCTTGATCACACATCGGTTGCGGTCAAGGTTTTGCGCCCCGATGCGACTCAAGGAAGGGAACAATTTCAGCGAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTTGGAGCATGCCCAGAATATGGCATTCTAGTGTACGAGCACATGTCGAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGCTATTCCTTGGCAGTACCGGTTTCGAATTGCTGCTGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACCAAACCAGAGCCATTAGTGCACCGTGATCTCAAACCAGCTAACATATTGCTAGACTACAATTATGTTAGCAAAATAAGCGACGTTGGTTTGGCTAGACTTGTACCCGCCGTGGCCGAAAATGTAACACAATGCTACATGACTTCTGCTGCTGGAACTTTCTGCTACATAGACCCTGAATATCAACAGACTGGAATGCTTGGGGTTAAATCTGATGTCTACTCATTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCGCCCATGGGGTTGGCTCACCAAATTGCTCGAGCTATTGAGAAGGGGACTTTGGCGGATTTTCTGGACCCAGCTGTGGATGATTGGCCAGTGGAACAAGCACTTTGCTTTGCAAAATTAGCACTTCAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTGCCAATGTTTTGTTGCCAGAACTTAACAGATTGAGAGAGTTTGGTGAGGAGAGAATGGAGCACCTGTTGTCAATGGATAGTTGTGGATCTTCGGGCGGATTTAGCCATACATCAACGGAGCAGGATGTAATGAGCGATCCACAACTACTGATGATTTCAGGAAGTTCGAAGAGCCAATCTAGTGAATCATCACAGGTAGGAGGAGAATGA 2379 44.98 MWLQKGNSVNGTKKGGIAGRGNGLVAIGVDREKGSQNALRWATEHLLVKGQTVILIHVVQRPSSAAAYLIGGAIICNSDGSFASNSPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDIILEDTDVVKALTEYVSYSAIENLVLGAPSKHGFMRFKSSSMGSSVSKGAPDFCTVYVISKGKVSSVRHATRLAPAASPLLDHLQKLSKPIVKGTGTPQHKFNLRDRTSFKPRNFQDESIKPEISQGVDRTSISKYSGGFSESESDISFISSGRPSTDRTSSVALDYESAPLQYSNSSDQSFASLPFKPKWTDHNQLNDFSSVSDESCRTSFSCSSQNLDEAELEMKRLKLELKQTMEMYSTACKEALTAKQKARELNNWRCEEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKKIAELESYKRENLEIEALKEAEEMQRALKNLAQSDIRYRRYTIEEIESATENFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDATQGREQFQREIDILSCIRHPNMVLLLGACPEYGILVYEHMSNGSLEDRLFRKGNTPAIPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDYNYVSKISDVGLARLVPAVAENVTQCYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHQIARAIEKGTLADFLDPAVDDWPVEQALCFAKLALQCAELRRKDRPDLANVLLPELNRLREFGEERMEHLLSMDSCGSSGGFSHTSTEQDVMSDPQLLMISGSSKSQSSESSQVGGE 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6129741 6136302 - Cp4.1LG04g05120.1 Cpe04g00570 468132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00570 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Cpe04g00570 792 Gene3D Phosphorylase Kinase; domain 1 447 541 - -
Cpe04g00570 792 MobiDBLite consensus disorder prediction 235 278 - -
Cpe04g00570 792 SUPERFAMILY Protein kinase-like (PK-like) 451 727 IPR011009 -
Cpe04g00570 792 PANTHER OS02G0152300 PROTEIN 21 788 - -
Cpe04g00570 792 CDD STK_N 24 178 - -
Cpe04g00570 792 Coils Coil 381 401 - -
Cpe04g00570 792 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 21 788 - -
Cpe04g00570 792 ProSiteProfiles Protein kinase domain profile. 469 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00570 792 Gene3D HUPs 24 175 IPR014729 -
Cpe04g00570 792 Coils Coil 421 450 - -
Cpe04g00570 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 175 - -
Cpe04g00570 792 Gene3D Transferase(Phosphotransferase) domain 1 542 748 - -
Cpe04g00570 792 Pfam Protein kinase domain 470 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00570 792 Coils Coil 328 355 - -
Cpe04g00570 792 MobiDBLite consensus disorder prediction 229 278 - -
Cpe04g00570 792 SMART serkin_6 469 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00570 Cpe-Chr4:6129741 Cpe07g00774 Cpe-Chr7:6846738 0 dispersed
Cpe13g00095 Cpe-Chr13:682750 Cpe04g00570 Cpe-Chr4:6129741 9.14E-130 dispersed
Cpe15g00574 Cpe-Chr15:6569374 Cpe04g00570 Cpe-Chr4:6129741 9.06E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62339 PF00069 Pkinase 2.70E-40 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00570 - - csv:101202855 1233.39