Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00580 | ATGCCGGCAATGGCTTCTCCATGGGGCAAACCAGGCGCTTGGGCGCTAGATTCCGAGGAACACGAAGCTGAACTCCTCAAAGAAGAGCAGGAGCAGCAGCAGCAGCAGCAGAAGAAGGCGGAGCTCAGCCTGGATTTTCCGTCCCTCAACGACGCCTTGGCCACCAAGCAGAAGAAGAAAGGGCAAACTCTCTCGTTGGCGGAGTTCACCGCCCATGCAGGTAGCGGCTCGAAATATTCTTCGCAGGGCCGCACTCATGAAGATGTATTGGTACTTCCTACCGGCCCTCGCGAACGCACGGCGGAGGAGCTAGACCGGAACAAGCTTGGTGGTGGATTTAGGAATTATGGCTCGAATGGTTCTTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCGTCTAACTCGAAGTGGGGTTCGTCTAGGGTCTCTGATGAAAATAGGAGGAATGATGGTGGATTTAATAGGGGGGATTCGAGTAAGGAATTTGTACCTTCTAGGGCTGACGAAGTCGATAATTGGGCTTCAACTAAGAAACCAATGGCTGGAAATGGATTTGAGAGGAGGGATAGAGGATTAGGGTTTTCGGATTCGCAATCCTCAAAAGCCGACGAATCTGAGAGTTGGGTTTCTAATAAGAGCAATGTTCCATCGGATGCAAGGAGATTTGGGGCTAACGGCGGATTTGAAAGAGAGCGACGAGGAGGGTTCCCCGCGAGCGGCGGCGGTGCGGATTCAGACACTTGGGGGAGGAAGAAAGATGAAGGTAATATTAGCGGCGGCGGCGGTGGTGGTGCGGATTCAGATACTTGGGGGAGGAAGAAAGATGAAGGTAATTCTGGCGGCGGCGGTGGTGGTAGTCGGCCAAAGCTTAATCTGCAGCCACGTACGCTGCCGGTGAACGATGTGAAGTCGTCGGAGATATCAGGGACGACGGCGAGGTCCAAGAGTTTGAATCCGTTTGGAGAGGCGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACGAGGAGTTAGAGTTGAAGATTAAGGAAGTGTCGATGGAGAAGACTGAAAAATCCAACCCCATTGGGAAAAAGAGCTTTGGCAATGGAACTGCTCGTGCTGCTGAGGACAGAACAGAGAGGAGCTGGAGGAAGCCGGAGTCGCCTGAGGAGTCACCGGAGGACAGTGTGGAGGACAACGAAAATGGTGAAGGCGAAGTCGAAGAGGACGGGAACAAGAACGAAGCTTGA | 1257 | 52.51 | MPAMASPWGKPGAWALDSEEHEAELLKEEQEQQQQQQKKAELSLDFPSLNDALATKQKKKGQTLSLAEFTAHAGSGSKYSSQGRTHEDVLVLPTGPRERTAEELDRNKLGGGFRNYGSNGSYERSNRYSNGDDSSNSKWGSSRVSDENRRNDGGFNRGDSSKEFVPSRADEVDNWASTKKPMAGNGFERRDRGLGFSDSQSSKADESESWVSNKSNVPSDARRFGANGGFERERRGGFPASGGGADSDTWGRKKDEGNISGGGGGGADSDTWGRKKDEGNSGGGGGGSRPKLNLQPRTLPVNDVKSSEISGTTARSKSLNPFGEARPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNPIGKKSFGNGTARAAEDRTERSWRKPESPEESPEDSVEDNENGEGEVEEDGNKNEA | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6195809 | 6203149 | + | Cp4.1LG04g05040.1 | Cpe04g00580 | 468142 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 23 | 46 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 353 | 418 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 376 | 393 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 197 | 220 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 394 | 408 | - | - | |
Cpe04g00580 | 418 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 | 1 | 393 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 72 | 333 | - | - | |
Cpe04g00580 | 418 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 393 | IPR010433 | GO:0003743 | |
Cpe04g00580 | 418 | Pfam | Plant specific eukaryotic initiation factor 4B | 4 | 363 | IPR010433 | GO:0003743 | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 299 | 319 | - | - | |
Cpe04g00580 | 418 | Coils | Coil | 16 | 45 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 143 | 175 | - | - | |
Cpe04g00580 | 418 | MobiDBLite | consensus disorder prediction | 118 | 142 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00580 | Cpe05g01315 | CCT | |
Cpe04g00580 | Cpe16g00301 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00580 | Cpe-Chr4:6195809 | Cpe05g01315 | Cpe-Chr5:9243915 | 1.31E-109 | dispersed | |
Cpe16g00301 | Cpe-Chr16:4947554 | Cpe04g00580 | Cpe-Chr4:6195809 | 4.91E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00580 | - | - | bhj:120077882 | 536.954 |