Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00580 ATGCCGGCAATGGCTTCTCCATGGGGCAAACCAGGCGCTTGGGCGCTAGATTCCGAGGAACACGAAGCTGAACTCCTCAAAGAAGAGCAGGAGCAGCAGCAGCAGCAGCAGAAGAAGGCGGAGCTCAGCCTGGATTTTCCGTCCCTCAACGACGCCTTGGCCACCAAGCAGAAGAAGAAAGGGCAAACTCTCTCGTTGGCGGAGTTCACCGCCCATGCAGGTAGCGGCTCGAAATATTCTTCGCAGGGCCGCACTCATGAAGATGTATTGGTACTTCCTACCGGCCCTCGCGAACGCACGGCGGAGGAGCTAGACCGGAACAAGCTTGGTGGTGGATTTAGGAATTATGGCTCGAATGGTTCTTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCGTCTAACTCGAAGTGGGGTTCGTCTAGGGTCTCTGATGAAAATAGGAGGAATGATGGTGGATTTAATAGGGGGGATTCGAGTAAGGAATTTGTACCTTCTAGGGCTGACGAAGTCGATAATTGGGCTTCAACTAAGAAACCAATGGCTGGAAATGGATTTGAGAGGAGGGATAGAGGATTAGGGTTTTCGGATTCGCAATCCTCAAAAGCCGACGAATCTGAGAGTTGGGTTTCTAATAAGAGCAATGTTCCATCGGATGCAAGGAGATTTGGGGCTAACGGCGGATTTGAAAGAGAGCGACGAGGAGGGTTCCCCGCGAGCGGCGGCGGTGCGGATTCAGACACTTGGGGGAGGAAGAAAGATGAAGGTAATATTAGCGGCGGCGGCGGTGGTGGTGCGGATTCAGATACTTGGGGGAGGAAGAAAGATGAAGGTAATTCTGGCGGCGGCGGTGGTGGTAGTCGGCCAAAGCTTAATCTGCAGCCACGTACGCTGCCGGTGAACGATGTGAAGTCGTCGGAGATATCAGGGACGACGGCGAGGTCCAAGAGTTTGAATCCGTTTGGAGAGGCGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACGAGGAGTTAGAGTTGAAGATTAAGGAAGTGTCGATGGAGAAGACTGAAAAATCCAACCCCATTGGGAAAAAGAGCTTTGGCAATGGAACTGCTCGTGCTGCTGAGGACAGAACAGAGAGGAGCTGGAGGAAGCCGGAGTCGCCTGAGGAGTCACCGGAGGACAGTGTGGAGGACAACGAAAATGGTGAAGGCGAAGTCGAAGAGGACGGGAACAAGAACGAAGCTTGA 1257 52.51 MPAMASPWGKPGAWALDSEEHEAELLKEEQEQQQQQQKKAELSLDFPSLNDALATKQKKKGQTLSLAEFTAHAGSGSKYSSQGRTHEDVLVLPTGPRERTAEELDRNKLGGGFRNYGSNGSYERSNRYSNGDDSSNSKWGSSRVSDENRRNDGGFNRGDSSKEFVPSRADEVDNWASTKKPMAGNGFERRDRGLGFSDSQSSKADESESWVSNKSNVPSDARRFGANGGFERERRGGFPASGGGADSDTWGRKKDEGNISGGGGGGADSDTWGRKKDEGNSGGGGGGSRPKLNLQPRTLPVNDVKSSEISGTTARSKSLNPFGEARPREEVLAEKGHDWKKLDEELELKIKEVSMEKTEKSNPIGKKSFGNGTARAAEDRTERSWRKPESPEESPEDSVEDNENGEGEVEEDGNKNEA 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6195809 6203149 + Cp4.1LG04g05040.1 Cpe04g00580 468142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00580 418 MobiDBLite consensus disorder prediction 23 46 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 353 418 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 376 393 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 197 220 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 394 408 - -
Cpe04g00580 418 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 393 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 72 333 - -
Cpe04g00580 418 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 393 IPR010433 GO:0003743
Cpe04g00580 418 Pfam Plant specific eukaryotic initiation factor 4B 4 363 IPR010433 GO:0003743
Cpe04g00580 418 MobiDBLite consensus disorder prediction 299 319 - -
Cpe04g00580 418 Coils Coil 16 45 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 143 175 - -
Cpe04g00580 418 MobiDBLite consensus disorder prediction 118 142 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00580 Cpe05g01315 CCT
Cpe04g00580 Cpe16g00301 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00580 Cpe-Chr4:6195809 Cpe05g01315 Cpe-Chr5:9243915 1.31E-109 dispersed
Cpe16g00301 Cpe-Chr16:4947554 Cpe04g00580 Cpe-Chr4:6195809 4.91E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00580 - - bhj:120077882 536.954