Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00583 ATGAGCATCTTTCACCCCCCTCCTCCGCCGTCCTCCTCCTCCGCCGTGAAGTGGCTCAGCCTAGTCTCCGCCGTCTGGGTCCAATCCATCGCAGGCAACAACTACACCTTCTCCAACTACTCCGCCGCCCTCAAATCCCTCATGAACCTCTCCCAACTCCAACTCAACAATCTCTCCGTCGCCAAAGACTTAGGCAAAGCCTTTGGCCTCCTTTCCGGCCTCGCCTCCGACCGCCTCCCCCCCTCCCTCCTCCTCCTCATCGGCTCCCTCGAAGGCCTTATCGGCTACGGCGGACAATGGCTCGTCGTCAGCAAAACAATCAACCCCCTCCCTTACTGGCAGATAAGTATTTTTATGTGCATGGGAGGGAATAGTAGCACTTGGATGAACACCGCCGTGCTCGTTACTTGCCTCAGAAACTTCCGGCGAAACATAGGCTCTGTTTCCGGCGTTCTCAAAGGCTACGTCGCTCTCAGCACCGCCATTTTCACCGATCTCTGTTTCGCCCTTTTCTCCAATGATCCCTCTTCCTTTCTCGCCCTTCTCGCCGTCGTCCCCTTCGCCGTTTGCCTCATTGCCATTCTCTTCCTCCGTGAAACCCCCTTCGCCGTCGATAATGAAACAGAGGATTCCCAATACTTCTGGGTCCTCAACGCTATCGCCGTCGCCGTCGCCGTCAGTCTCTTGGCCTTTGATTCGATCCCCAATCCCACCTCATCCCTATCGATAATTTTCTCCATTGTGTTATTGATTCTACTCGTTTCCCCTCTGGTAATCCCAATTCACTCATTCCTCAAGAACAGGGGCCGGTCCGGTGCGGCTGTAGAGGCGTTGTTGGCGGCTGAGGAAGTGGTGGAGGTGGAGGGAAATGGGAATCCGGTGATAGGAGAAGATCACACGATTGTGGAGGCGATGAAGACGGTTGAATTTTGGCTTCTGTTTGTGTCGTTTTTGTTTGGAGTGGGTACCGGATTGGCAGTGATGAACAACATGGGTCAAATCGGATTGGCTCTTGGATACGACGACGTTTCGAGCTTCATCTCTTTGATGAGCATTTGGGGTTTTTTTGGTCGGATTTTATCGGGATCGGCGTCGGAGTATTTCATCAAGTAA 1113 53.46 MSIFHPPPPPSSSSAVKWLSLVSAVWVQSIAGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLSGLASDRLPPSLLLLIGSLEGLIGYGGQWLVVSKTINPLPYWQISIFMCMGGNSSTWMNTAVLVTCLRNFRRNIGSVSGVLKGYVALSTAIFTDLCFALFSNDPSSFLALLAVVPFAVCLIAILFLRETPFAVDNETEDSQYFWVLNAIAVAVAVSLLAFDSIPNPTSSLSIIFSIVLLILLVSPLVIPIHSFLKNRGRSGAAVEALLAAEEVVEVEGNGNPVIGEDHTIVEAMKTVEFWLLFVSFLFGVGTGLAVMNNMGQIGLALGYDDVSSFISLMSIWGFFGRILSGSASEYFIK 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6224377 6225568 + Cp4.1LG04g05030.1 Cpe04g00583 468145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00583 370 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 289 370 - -
Cpe04g00583 370 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 277 - -
Cpe04g00583 370 SUPERFAMILY MFS general substrate transporter 8 368 IPR036259 -
Cpe04g00583 370 Pfam Nodulin-like 17 261 IPR010658 -
Cpe04g00583 370 Gene3D MFS general substrate transporter like domains 15 211 IPR036259 -
Cpe04g00583 370 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 289 370 - -
Cpe04g00583 370 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 10 277 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00583 Cpe05g01382 CCT
Cpe04g00583 Cpe16g00309 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00583 Cpe-Chr4:6224377 Cpe05g01382 Cpe-Chr5:9733765 1.60E-172 dispersed
Cpe16g00309 Cpe-Chr16:4977055 Cpe04g00583 Cpe-Chr4:6224377 3.42E-165 wgd
Cpe04g00583 Cpe-Chr4:6224377 Cpe04g01520 Cpe-Chr4:11973089 1.59E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00583 - - cmo:103490296 525.398