Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe04g00584 | ATGGCAATTGGCTGCATTCTCTTAGCCATTGGCATGTCAAGTTCCTTATACATCGGCTCGATCATTGTTGGTATCTGTTACGGTGTTCGTCTCGCCATCAGTGTCTCGATCGCTTCTGAAACTTTCGGGCTCAAAGACTATGGCATGATCTACAACGTTCTGATCCTCAACCTCCCACTCGGTTCGTGCCTCTTCTCGGGGCTGCTGGCCGGGATTCTCTACGACATGGAGGCGACAAAGACCGAGGAGGGTGGGAATACGTGCATGGGAGCGCATTGTTACAGGCTTGTGTTTGTGGTAATGGCTTGTTCATGTGTGGTTGGGCTTGGCGTGGACTTGCTTTTGTTCATTAGAACTAAGAGATTGTACTCCAAAATAAGAGATGGAAGGTGA | 393 | 49.11 | MAIGCILLAIGMSSSLYIGSIIVGICYGVRLAISVSIASETFGLKDYGMIYNVLILNLPLGSCLFSGLLAGILYDMEATKTEEGGNTCMGAHCYRLVFVVMACSCVVGLGVDLLLFIRTKRLYSKIRDGR | 130 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 6226173 | 6226565 | + | Cp4.1LG04g05090.1 | Cpe04g00584 | 468146 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe04g00584 | 130 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 1 | 128 | - | - | |
| Cpe04g00584 | 130 | Gene3D | MFS general substrate transporter like domains | 1 | 129 | IPR036259 | - | |
| Cpe04g00584 | 130 | PANTHER | - | 1 | 128 | - | - | |
| Cpe04g00584 | 130 | SUPERFAMILY | MFS general substrate transporter | 2 | 121 | IPR036259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00584 | Cpe-Chr4:6226173 | Cpe05g01382 | Cpe-Chr5:9733765 | 1.07E-56 | dispersed | |
| Cpe18g00811 | Cpe-Chr18:7561039 | Cpe04g00584 | Cpe-Chr4:6226173 | 4.41E-24 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe04g00584 | - | - | csv:101205980 | 203.756 |