Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00591 ATGGACGACGGGGAGATTGATTTTTCGAATCAAGAAGTGTTTTCGAACCCTAATATGGCGATTCCAAGCAGTTGCTCAATGGATAGTTTCTTTGATGATCTTCTCAAAGACGTTCATACTTGTACTCATACTCATACTTGCATTCCACCGGGCCCTGATTACTCTCATACCCACACCTGTTTCCATGTCCACACTAAAATTCTCCCTGCCTCACCTGAAGAAGACAAGGTTGTTACTGATGATACTGCGGAATCGACTGAAAAGAAGTCGAAGAAACGCCCGTTGGGTAACCAGGAAGCTGTTCGTAAGTATCGTGAGAAGAAGAAGGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGATGAAGAGGTTGCAAGGGCAGGCAGCATTGGAGGCTGAGATTACTCGGCTCAAGTGTTTGCTTGTGGATATTAGGGGCAGAATTGAAGGGGAGATTGGTTCGTTTCCTTATCAGAAAACTGGTAATCCCAACCTGTCCAACACAAGCAACCCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGATGATCAGGTTTACTGCCTTCGTCCTGAGGGTAATGGAAGTAGAAGTGGTGAAGGTGCTGTGATAAATGGACAGAGTTTTGGTGCTTGTGGATTTGAAAATCTTCAGTGTTTGGTGAATCATGACTCGGGATCGAAAGAGCTACTCGGGGACGGGATGGGGAATGCTGTTTCAAATGATACTTCTTCTGGAGTGACAAAGAGAAAAGGTGAAAACTGA 795 44.91 MDDGEIDFSNQEVFSNPNMAIPSSCSMDSFFDDLLKDVHTCTHTHTCIPPGPDYSHTHTCFHVHTKILPASPEEDKVVTDDTAESTEKKSKKRPLGNQEAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEITRLKCLLVDIRGRIEGEIGSFPYQKTGNPNLSNTSNPGAYVMNPCNMQCDDQVYCLRPEGNGSRSGEGAVINGQSFGACGFENLQCLVNHDSGSKELLGDGMGNAVSNDTSSGVTKRKGEN 264
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 6254361 6255155 + Cp4.1LG04g05070.1 Cpe04g00591 468153
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00591 264 Gene3D - 75 153 - -
Cpe04g00591 264 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Cpe04g00591 264 MobiDBLite consensus disorder prediction 240 264 - -
Cpe04g00591 264 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Cpe04g00591 264 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Cpe04g00591 264 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Cpe04g00591 264 Coils Coil 105 132 - -
Cpe04g00591 264 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Cpe04g00591 264 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Cpe04g00591 264 CDD bZIP 91 143 - -
Cpe04g00591 264 MobiDBLite consensus disorder prediction 72 102 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe04g00591 Cpe16g00318 CCT
Cpe04g00591 Cpe05g01371 CCT
Cpe04g00591 Cpe15g00593 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00593 Cpe-Chr15:6688098 Cpe04g00591 Cpe-Chr4:6254361 3.76E-163 wgd
Cpe16g00318 Cpe-Chr16:5045606 Cpe04g00591 Cpe-Chr4:6254361 5.76E-123 wgd
Cpe04g00591 Cpe-Chr4:6254361 Cpe05g01371 Cpe-Chr5:9639800 5.17E-129 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49354 PF07716 bZIP_2 9.20E-13 CL0018 Cpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00591 K25785 - csv:101208161 449.514