Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00598 ATGTCGAAAGAGGTGATGGAAGAAGGACAATCCGGCCTGAGAAAGGACTACGTCGATCCACCGCCGGCCCCGCTCATCGACGTCGCCGAACTCTCCCTCTGGTCCTTTTACAGAGCCCTAATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACGATCGCCACCGTCATCGGCAACAACAAACAGACCAAGGTTTGCGACGGCGTCGGAATCCTCGGAATCGCTTGGGCCTTCGGCGGCATGATTTTCGTCCTCGTCTATTGCACCGCCGGAATCTCAGGTGGACACATTAATCCGGCGGTGACATTTGGGCTGTTTCTGGCGAGGAAGGTGTCGCTGATCAGAGCCGTCGGGTACATGGTAGCGCAGTGCGCCGGAGCAATCGTCGGCGTTGGGTTGGTGAAGGCGTTTATGAAGCATGATTATAACGGCCACGGCGGCGGAGCTAACTCCGTTCAGTCTGGTTACAGTAGGGGTACGGCTCTTGGCGCTGAGATCATCGGAACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACCGATCCCAAGAGAAGCGCGCGTGACTCTCACATTCCGGTTTTGGCGCCATTGCCGATTGGATTTGCGGTGTTTATGGTTCATTTGGCCACCATTCCCATCACCGGAACCGGAATTAACCCGGCGAGAAGCTTCGGCGCCGCCGTGATTTACAACAATGAGAAAGCCTGGAACGACCATTGGATCTTCTGGGTCGGTCCGTTCGTCGGAGCACTGGCGGCGGCTGCGTACCACCAGTATATTCTCCGGGCAGCCGCCATTAAAGCTTTGGGATCATTCCGCAGCAACCCCACCAACTGA 843 55.87 MSKEVMEEGQSGLRKDYVDPPPAPLIDVAELSLWSFYRALIAEFIATLLFLYVTIATVIGNNKQTKVCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVGYMVAQCAGAIVGVGLVKAFMKHDYNGHGGGANSVQSGYSRGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWNDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6291765 6293313 + Cp4.1LG04g04870.1 Cpe04g00598 468160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00598 280 Pfam Major intrinsic protein 31 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 280 IPR034294 -
Cpe04g00598 280 SUPERFAMILY Aquaporin-like 30 264 IPR023271 -
Cpe04g00598 280 CDD MIP 38 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 TIGRFAM MIP: MIP family channel proteins 42 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Cpe04g00598 280 Gene3D Glycerol uptake facilitator protein. 23 280 IPR023271 -
Cpe04g00598 280 PANTHER AQUAPORIN PIP-TYPE-RELATED 1 280 - -
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 202 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe04g00598 280 PRINTS Major intrinsic protein family signature 242 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00598 Cpe15g00598 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00598 Cpe-Chr4:6291765 Cpe19g00409 Cpe-Chr19:3617325 1.35E-156 dispersed
Cpe15g00598 Cpe-Chr15:6724194 Cpe04g00598 Cpe-Chr4:6291765 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00598 K09872 - csv:101209627 545.428