Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00604 | ATGTTATCGGAGTTGATGAACTTATTGAGGGCCTGTTTTGGGCCAAGCTCCGATCGGTCTGCAGCGGGCAATATCAGGGGGCGACAGGACGGGTTGTTGTGGTACAAAGATAGTGGACACCATTTGAATGGTGAGTACTCAATGTCTGTAGTTCAGGCCAACAATTTGCTTGAAGATCAGAGTCAGATTGAGTCAGGCAGTTTGAGCTCAGATGAGTCTGGTCCCTTTGGGACCTTTGTTGGTGTGTATGATGGCCATGGAGGCCCCGAGACGTCTCGGTATATCTGTGATCATCTCTTCCAGCATCTCAAGAGATTTACTTCCGAGCAAGATTCGATGTCTGCGGATGTAATACGCAAGGCATTCCAAGCGACTGAAGACGGTTTTCTTTCTATAGTCCGAAGACAATGGTCGACGAATCCACAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATATGTAATGGGACTCTCTATATTGCAAATCTAGGTGATTCTCGTGCCGTTTTGGGTAGAATGGTGAAGGCAACCGGTGATGTTATAGCCATTCAGTTATCGACGGAGCATAATGTTGCTAACGAGTCTGTGCGGCAAGAGCTGCAATCTTTGCACCCCGAAGACTCGCAAATTGTGGTTTTAAAGCATAATGTTTGGCGCGTAAAGGGCATAATACAGGTTAGTTAG | 690 | 46.52 | MLSELMNLLRACFGPSSDRSAAGNIRGRQDGLLWYKDSGHHLNGEYSMSVVQANNLLEDQSQIESGSLSSDESGPFGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDSMSADVIRKAFQATEDGFLSIVRRQWSTNPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRMVKATGDVIAIQLSTEHNVANESVRQELQSLHPEDSQIVVLKHNVWRVKGIIQVS | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6319570 | 6321458 | + | Cp4.1LG04g04910.1 | Cpe04g00604 | 468166 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00604 | 229 | CDD | PP2Cc | 46 | 229 | IPR001932 | - | |
Cpe04g00604 | 229 | PANTHER | ALPHABET, ISOFORM E-RELATED | 6 | 229 | - | - | |
Cpe04g00604 | 229 | ProSitePatterns | PPM-type phosphatase domain signature. | 79 | 87 | IPR000222 | GO:0043169 | |
Cpe04g00604 | 229 | ProSiteProfiles | PPM-type phosphatase domain profile. | 45 | 229 | IPR001932 | - | |
Cpe04g00604 | 229 | Gene3D | - | 33 | 229 | IPR036457 | - | |
Cpe04g00604 | 229 | SUPERFAMILY | PP2C-like | 48 | 229 | IPR036457 | - | |
Cpe04g00604 | 229 | SMART | PP2C_4 | 37 | 229 | IPR001932 | - | |
Cpe04g00604 | 229 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 6 | 229 | - | - | |
Cpe04g00604 | 229 | Pfam | Protein phosphatase 2C | 77 | 229 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00604 | Cpe16g00325 | CCT | |
Cpe04g00604 | Cpe05g01363 | CCT | |
Cpe04g00604 | Cpe15g00605 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00317 | Cpe-Chr4:3923949 | Cpe04g00604 | Cpe-Chr4:6319570 | 1.44E-75 | dispersed | |
Cpe04g00604 | Cpe-Chr4:6319570 | Cpe19g00880 | Cpe-Chr19:6451702 | 1.90E-130 | dispersed | |
Cpe14g01040 | Cpe-Chr14:8734462 | Cpe04g00604 | Cpe-Chr4:6319570 | 2.57E-120 | wgd | |
Cpe15g00605 | Cpe-Chr15:6773776 | Cpe04g00604 | Cpe-Chr4:6319570 | 5.40E-157 | wgd | |
Cpe16g00325 | Cpe-Chr16:5096653 | Cpe04g00604 | Cpe-Chr4:6319570 | 1.82E-110 | wgd | |
Cpe04g00604 | Cpe-Chr4:6319570 | Cpe05g01363 | Cpe-Chr5:9586872 | 7.45E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00604 | - | K01102 | csv:101211601 | 412.149 |