Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00605 | AATAACATTTGTAGTCCATCAGATCCCAGTTTACATCTTCTTGCTGCTGTCCTCATTTCTCCTCGCCCTCGGTTCCGCTATCAGATCAGGAGAGCGAAAGCAACAGTGTTTGAAGTATGGGGATGGAACAAAACAATCACGATTCAGAGGAGGGGACTCTGGAGATTGGCATGGGTAGAATATAGAACAGTCTCTGGTGTTGCTGGTCCATTGGTTATTCTGGACAAAGTCAAGGGACCTAAGTTTCAGGAGATTGTTAATATTCGTCTAGGAGATGGATCAACCAGGCGTGGTCAAGTCCTGGAAGTTGATGGAGAGAAAGCTGTTGTCCAGGTTTTTGAAGGGACATCTGGAATTGATAACAAATATACAACTGTGCAATTTACCGGAGAGGTTTTGAAAACTCCAGTTTCCTTGGACATGCTTGGGCGAATTTTTAATGGTTCTGGAAAACCCATTGATAACGGTCCTCCTATCCTGCCCGAGGCTTACTTGGATATTTCTGGGAGTTCTATAAACCCTAGTGAAAGAACTTATCCCGAAGAGATGATACAGACTGGGATTTCTACAATTGATGTCATGAATTCCATTGCTAGAGGACAAAAGATCCCACTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATTGCTGCCCAGATTTGTCGTCAGGCTGGCTTGGTAAAGCGGTTGGAGAAATCTAAAGATCTTCTTGAGGGTGGTGAAGAGGACAACTTTGCCATTGTTTTTGCCGCTATGGGTGTTAACATGGAGACTGCTCAATTTTTTAAACGTGATTTTGAGGAAAATGGTTCAATGGAGAGAGTGACCCTATTTCTGAACCTGGCTAATGATCCTACAATTGAGCGTATTATCACTCCTCGTATTGCTCTTACCACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTCGTCATACTGACAGATATGAGTTCTTATGCTGATGCCCTTCGAGAGGTGTCTGCTGCACGAGAGGAAGTGCCTGGAAGGCGTGGATACCCTGATATTACACATCCTACTCCCGATCTTACTGGCTATATTACTGAGGGACAGATTTACATCGATAGGCAGCTCTATAACAGACAGATATACCCACCAATTAATGTCCTTCCTTCATTGTCTCGTCTTATGAAGAGTGCTATTGGTGAGGGAATGACCCGTAGGGATCATGCTGATGTATCCAACCAGCTCTATGCAAATTATGCAATTGGAAAGGATGTTCAGGCAATGAAAGCCGTGGTCGGAGAAGAAGCACTCTCTTCTGAGGATCTGCTCTATTTAGAGTTTTTGGACAAATTTGAGAGGAAGTTTGTCAGTCAAGGAGCTTACGACACTCGAAACATTTTCCAATCGCTCGATCTGGCATGGACACTGCTTCGTATTTTCCCTCGTGAACTTCTCCACCGTATACCTGCAAAGACTCTTGATCTGTTTTACAGCCGAGAATCTGCAAATTGA | 1482 | 43.79 | NNICSPSDPSLHLLAAVLISPRPRFRYQIRRAKATVFEVWGWNKTITIQRRGLWRLAWVEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSKDLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLFYSRESAN | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6326037 | 6331251 | + | Cp4.1LG04g04880.1 | Cpe04g00605 | 468167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00605 | 493 | CDD | ATP-synt_V_A-type_beta_N | 60 | 131 | - | - | |
Cpe04g00605 | 493 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B1-RELATED | 343 | 493 | - | - | |
Cpe04g00605 | 493 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 187 | 342 | IPR000194 | GO:0005524 | |
Cpe04g00605 | 493 | Gene3D | - | 343 | 493 | - | - | |
Cpe04g00605 | 493 | Gene3D | - | 69 | 342 | - | - | |
Cpe04g00605 | 493 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 134 | 388 | IPR027417 | - | |
Cpe04g00605 | 493 | Hamap | V-type ATP synthase beta chain [atpB]. | 58 | 491 | IPR022879 | - | |
Cpe04g00605 | 493 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 64 | 130 | IPR004100 | GO:0046034|GO:1902600 | |
Cpe04g00605 | 493 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 373 | 382 | IPR020003 | GO:0005524 | |
Cpe04g00605 | 493 | CDD | V_A-ATPase_B | 132 | 384 | - | - | |
Cpe04g00605 | 493 | CDD | ATP-synt_V_A-type_beta_C | 392 | 486 | - | - | |
Cpe04g00605 | 493 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B1-RELATED | 59 | 343 | - | - | |
Cpe04g00605 | 493 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 343 | 382 | IPR000194 | GO:0005524 | |
Cpe04g00605 | 493 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 343 | 493 | IPR022879 | - | |
Cpe04g00605 | 493 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 59 | 343 | IPR022879 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe04g00605 | Cpe15g00607 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00605 | Cpe-Chr4:6326037 | Cpe17g00407 | Cpe-Chr17:3036883 | 4.75E-08 | dispersed | |
Cpe15g00607 | Cpe-Chr15:6781831 | Cpe04g00605 | Cpe-Chr4:6326037 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00605 | K02147 | - | csv:101211838 | 834.713 |