Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe04g00610 | ATGGATTCCTTCAAGAAATCTCTCAAACCCAATGGACCTTTCAAGCATTCCAGGAAGATTTCTGCCGGCGGAGCTGGAAGCGAAATCAATCAGGAGGAGCTCCCCATTCTTCTCGATCACCAACCTTCTGATCAGCATAATCGCCATAAGGTTCGTCGACCAGCCAACGACGGCGAACCTTCTGGACACAATGAGGTCATTCTCAAGGTCGATGATGGCGGTTCTTCGGCTGTCTCAAGATCGCAGGAGTCTGCCGGCTATGGCGGGAAGGTTTGGCGGGAATCTAGGTATGACTTCTGGAGTAATAATGATGGAATTGGAACTGGAGGTAGTGCGAGTTGGGCTAGTGGTGCGAGAGCGAGTGATAGTGGTGATAGAAATGAGGGATTTGAATTTGTGAGGCGTGGGAATGGTACGGATGATCCGCCGACGAAGCTGATTGGTGATTTTCTTCATAAGCAGAAAGTTAGAGGCGAAACGACTTTGGATTTGGATCTGGAAATGGAGGAGTTGCGGCTTGATAGGACTAAAACTCCGATGATGGACTCGCCGTTGAGTCGGGCTTCGAAGGATCTTAAAGTTTCGTTTCAACATGACTCGACTGAAATATCGAGCAATGAATCGGTTCGACGGCGGTATAAAGAGTTCCGTGAAATGCAAGAAGAGAGCAAAAGAGGTCAGCCGTCATGGCATCAATCGCACCATGAACATGGCGGATCTTCCATCTCTGGTGTTCAGAACGACTCTGTTGCTGAAGCTATGAGAAGCGCATCTAACTTGTCTTTTCAGAGCACTCTTTCGTTGCATAGGAAATCTCATTTGCTGAAGGCTAAAGGCAAGTCGAGATTGACAGATCCGCCGGCAGAACCAGACCGTCTCTCCGGCCTCGTTAACAAATCGGGACAGCTCCGATCAGGGTTTCTCGGCAGGACTGACGATGAGGAGGACGACCCTTTTCTGGAGGAGGATTTTCCAGACGATTTCAGAAGGGGTAAGCTCGATGCTCTAACTGTGCTTCAATGGATCAGTTTGTTTCTAATCACTGCTGCTTTAGTTTGCACACTTTCTATTCGCCATTTGAGAGAAAATAGCTTATGGGAATTTAGTATATGGAAATGGGAGGTGATGGTTTTGGTACTGATTTGTGGGCGATTGGTATCTGGTTGGGGGATTGGAATTGGAGTATTTTTCATTGAGAGGAATTTTCTTTTGCGTAAGAAGGTTCTGTATTTCGTTTATGGGATTAAGAGGCCAGTGCAGAATTGTCTATGGTTAGGCCTTGTTCTAATCGCTTGGCATTTGTTGTTTGATAAGCGAGTTAAGAATCAAACCAACAGCGATATACTCGATTACGTGAGGAAAAGTTTAGTGTGTCTCTTGTTAAGCACATTGATTTGGCTAGCTAAGACCCTGATGCTGAAGGTGCTTGCATCTTCCTTCCATGTGAGCACATACTTCGATCGAATTCAGGAATCGTTGTTTAACCAATATGTAATCGAGACGCTTTCGGGGCCACCACGGATTGAGCTTCAGAAGAGTGAGGAAGAACAGAAGAAAATTGCAGATGAAGTTCAAAGACTACAGAGTGCAGGAGTTCCCGTACCCCCTGATCTAAGGGCAGCAGCTTTATCTTCTATAAAGAGTGGTGAAAGGGTAAGAAGCAATGTGGCGAGCCAGAGAAGTTTGCGTGGAAAAGATCCCAAACTCTCAAGGGTATCTACCAAAAATGGAAGTGAAGGGATAAATATTGACCACTTGCACAAGCTAACTTCGAAGAATGTATCTGCTTGGAATATGAAGAGGTTGCTGAAAATAGTTAGATATGGAAGTATTACCACACTGGATGAGCAGATACAGGGGCCGTCTCTTGATGATGAATCTACTACTACCGAGATCAAAAGTGAACGCGAGGCAAAGGCTGCTGCTAAGAAGATTTTTCAGAACGTGGCTCGGCCCGGGTTCAATCGCTTTGAGGGAGCAACTGAGACCCGGAGGATAAGCAAGTCTGCCTTGAAAAATTGGGTGGTCAATGCCTTCAGAGAACGTAGAGCCCTTTCTTTAACACTGAATGATACCAAAACAGCTGTTGAGAGACTTGGCCTTGTGGTGAATGTCATATTCAGCATCTTTATAATAGTTTTATGGATTATATTACTAGGAATTGCCTCCAGAAAAGTCATCCTCTACATTAGTTCTCAAATAGTGCTTGTGGCATTCATTTTTGGGAACACTCTAAAGAACATATTTGAAGCAATCATCTTCTTGTTTGTCATGCATCCGTTCGACGTCGGAGATCGATGTGAAATCGATGATATTCAGATGGTTGTAGAGGAAATGAACATCTTGACTACTGTGTTCTTGAGACACGACAACCTGAAGATTATTGTCCCAAATAGTGTTCTTGCAACCAAAGTGATCCACAACCACTACCGTAGTCCCGACATGGGCGAATTTATTGAAATCTGTGTCCATATAATGACGCCACTTGAGAAAATTACGGCCATGAAACAGAGAATCATAAGTTACATTGAATCCGACAAAGAACACTGGTGTCCTTCCCCAATTATTTTGATGAAGGATATAGATAGTGCAGACAAATTGGCCATGTCAATTTGGCTGTCACACACAATGAACCACCAAGACATAAGGGAAAGATGGGCCCGGAGATCCGTCGTGGTCGAAGAGGTATTGAAGATCTGTCAAGAGTTCGACATTACACCGTCTCTCGTCCCGCCACCGTGA | 2742 | 44.86 | MDSFKKSLKPNGPFKHSRKISAGGAGSEINQEELPILLDHQPSDQHNRHKVRRPANDGEPSGHNEVILKVDDGGSSAVSRSQESAGYGGKVWRESRYDFWSNNDGIGTGGSASWASGARASDSGDRNEGFEFVRRGNGTDDPPTKLIGDFLHKQKVRGETTLDLDLEMEELRLDRTKTPMMDSPLSRASKDLKVSFQHDSTEISSNESVRRRYKEFREMQEESKRGQPSWHQSHHEHGGSSISGVQNDSVAEAMRSASNLSFQSTLSLHRKSHLLKAKGKSRLTDPPAEPDRLSGLVNKSGQLRSGFLGRTDDEEDDPFLEEDFPDDFRRGKLDALTVLQWISLFLITAALVCTLSIRHLRENSLWEFSIWKWEVMVLVLICGRLVSGWGIGIGVFFIERNFLLRKKVLYFVYGIKRPVQNCLWLGLVLIAWHLLFDKRVKNQTNSDILDYVRKSLVCLLLSTLIWLAKTLMLKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPRIELQKSEEEQKKIADEVQRLQSAGVPVPPDLRAAALSSIKSGERVRSNVASQRSLRGKDPKLSRVSTKNGSEGINIDHLHKLTSKNVSAWNMKRLLKIVRYGSITTLDEQIQGPSLDDESTTTEIKSEREAKAAAKKIFQNVARPGFNRFEGATETRRISKSALKNWVVNAFRERRALSLTLNDTKTAVERLGLVVNVIFSIFIIVLWIILLGIASRKVILYISSQIVLVAFIFGNTLKNIFEAIIFLFVMHPFDVGDRCEIDDIQMVVEEMNILTTVFLRHDNLKIIVPNSVLATKVIHNHYRSPDMGEFIEICVHIMTPLEKITAMKQRIISYIESDKEHWCPSPIILMKDIDSADKLAMSIWLSHTMNHQDIRERWARRSVVVEEVLKICQEFDITPSLVPPP | 913 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6360754 | 6365076 | - | Cp4.1LG04g04760.1 | Cpe04g00610 | 468172 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 554 | 577 | - | - | |
Cpe04g00610 | 913 | Pfam | Mechanosensitive ion channel | 703 | 905 | IPR006685 | GO:0016020|GO:0055085 | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 42 | 59 | - | - | |
Cpe04g00610 | 913 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 110 | 911 | IPR016688 | - | |
Cpe04g00610 | 913 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 2 | 100 | IPR016688 | - | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 277 | 297 | - | - | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Cpe04g00610 | 913 | SUPERFAMILY | Sm-like ribonucleoproteins | 749 | 809 | IPR010920 | - | |
Cpe04g00610 | 913 | Coils | Coil | 510 | 530 | - | - | |
Cpe04g00610 | 913 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 2 | 100 | - | - | |
Cpe04g00610 | 913 | Gene3D | - | 760 | 809 | IPR023408 | - | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 196 | 244 | - | - | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 110 | 144 | - | - | |
Cpe04g00610 | 913 | MobiDBLite | consensus disorder prediction | 204 | 232 | - | - | |
Cpe04g00610 | 913 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 110 | 911 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00610 | Cpe-Chr4:6360754 | Cpe06g00045 | Cpe-Chr6:232841 | 0 | dispersed | |
Cpe16g00335 | Cpe-Chr16:5154578 | Cpe04g00610 | Cpe-Chr4:6360754 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe04g00610 | K22048 | - | csv:101207426 | 1224.15 |