Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe04g00611 ATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCGTACGGCTCCTTGTCGCCGGCGCAGTCTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTTCGCCGTCTCAAGGATTCCGTCAACGAGGAGACGCTTCAGCCTGGTTTCGATGACGAACTATGGCTTCACTTTAATCGCCTTCCTACTCGATATGCTCTCGATGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATGTGCTCATGATCCTGCAAATCGACCTGCAATTGAAGTTCGCCTAGTGCAGGTCCAAGCCATTTCTGATGGGAATTCAGCTGATTTTGCTGCTTCCTGTCCTGTAAAAGACACTGATCATAATTCTTCAAATTTACCGAGCAGGCAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCCAACCTTGAAGCCCTCGCCCTTGAAGCTAATAACGCTCAGGATCAGGAGGTTGATCATTCCGTACATGCCAAAACACAATCTTTCCGGCCGATGCATGAAATAACTTTCTCTACGGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGATGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCGATAGAGAAGGAAGTCTTACAGGTTGAGAGGAAGGCTTGGCCAAATCATAAATCCTTTTCAATAAGGGAACGAGATATATCAATTAAACCTGATCCTGATCGTGTGGAAATTCCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTTGAGCATAAAGTTGCATCTGGATCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTCGCTATTAAAGTCCTTAAACCTGAACGCGTAGATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTGTACATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACTAAACCTCCAAGCTTGTGCATAGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCCTTGCTCAAGGTTGCCATTGATGTTTCCAAGGGAATGAACTACTTGCACCAAAATAACATCATTCACAGAGATCTCAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGCGTCGCCAGAGTGAAAGCTCAATCAGGAGTCATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGCAATTGTCTTGTGGGAGCTGCTTACTGGAAAGCTACCCTATGAATTCCTAACCCCATTACAAGCTGCAGTCGGAGTGGTACAAAAGGGCTTACGGCCTATTATTCCAAAGCACACTAATCCGAAGCTGGCTGAGTTGCTGGAAAAATGCTGGCAACAAGACCCCTCATGCCGGCCTGACTTCTCTGAAATTATCGACATTTTGTTGCAGATAACTAAGGAAGTTGCAGAAGATGGCGATGAACGACGGAAGGAGAAGAGTGGAGGATTACTTTCTGTGTTGAGACGAAACCATCAATGA 1719 44.85 MVMEDNESCGSRAYGSLSPAQSRQQRQKFEVYNEVLRRLKDSVNEETLQPGFDDELWLHFNRLPTRYALDVNVERAEDVLMHKRLLQCAHDPANRPAIEVRLVQVQAISDGNSADFAASCPVKDTDHNSSNLPSRQSIHPPPAFGSSPNLEALALEANNAQDQEVDHSVHAKTQSFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTAIEKEVLQVERKAWPNHKSFSIRERDISIKPDPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVDSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPIIPKHTNPKLAELLEKCWQQDPSCRPDFSEIIDILLQITKEVAEDGDERRKEKSGGLLSVLRRNHQ 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6366608 6373559 - Cp4.1LG04g04810.1 Cpe04g00611 468173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe04g00611 572 CDD ACT_TyrKc 179 246 - -
Cpe04g00611 572 Pfam Protein tyrosine and serine/threonine kinase 292 540 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 554 - -
Cpe04g00611 572 MobiDBLite consensus disorder prediction 551 572 - -
Cpe04g00611 572 PRINTS Tyrosine kinase catalytic domain signature 366 379 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 PRINTS Tyrosine kinase catalytic domain signature 403 421 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 PRINTS Tyrosine kinase catalytic domain signature 449 459 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Cpe04g00611 572 SUPERFAMILY Protein kinase-like (PK-like) 271 541 IPR011009 -
Cpe04g00611 572 SMART serkin_6 292 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00611 572 CDD STKc_MAP3K-like 298 541 - -
Cpe04g00611 572 ProSiteProfiles ACT domain profile. 181 253 IPR002912 -
Cpe04g00611 572 Coils Coil 231 251 - -
Cpe04g00611 572 ProSiteProfiles Protein kinase domain profile. 292 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe04g00611 572 SUPERFAMILY ACT-like 179 243 IPR045865 -
Cpe04g00611 572 MobiDBLite consensus disorder prediction 120 147 - -
Cpe04g00611 572 MobiDBLite consensus disorder prediction 1 21 - -
Cpe04g00611 572 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 18 554 - -
Cpe04g00611 572 MobiDBLite consensus disorder prediction 123 143 - -
Cpe04g00611 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Cpe04g00611 572 Gene3D Phosphorylase Kinase; domain 1 282 370 - -
Cpe04g00611 572 Gene3D Transferase(Phosphotransferase) domain 1 371 566 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g00611 Cpe15g00613 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00611 Cpe-Chr4:6366608 Cpe08g01301 Cpe-Chr8:9370950 0 dispersed
Cpe05g00984 Cpe-Chr5:6408989 Cpe04g00611 Cpe-Chr4:6366608 1.46E-48 dispersed
Cpe10g00595 Cpe-Chr10:3488252 Cpe04g00611 Cpe-Chr4:6366608 7.90E-64 dispersed
Cpe16g00671 Cpe-Chr16:7013061 Cpe04g00611 Cpe-Chr4:6366608 1.02E-46 dispersed
Cpe16g00735 Cpe-Chr16:7431807 Cpe04g00611 Cpe-Chr4:6366608 7.36E-50 dispersed
Cpe19g00798 Cpe-Chr19:6021387 Cpe04g00611 Cpe-Chr4:6366608 1.55E-63 dispersed
Cpe14g01045 Cpe-Chr14:8766023 Cpe04g00611 Cpe-Chr4:6366608 0 wgd
Cpe15g00613 Cpe-Chr15:6819267 Cpe04g00611 Cpe-Chr4:6366608 0 wgd
Cpe02g00053 Cpe-Chr2:277513 Cpe04g00611 Cpe-Chr4:6366608 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62340 PF07714 PK_Tyr_Ser-Thr 1.90E-73 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe04g00611 - - csv:101213048 1041.57